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Sf3b1 [nucleoplasm]
Stable Identifier
R-RNO-71968
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
SF3B1, G3V7T6
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
Epigenetic regulation of gene expression (Rattus norvegicus)
Positive epigenetic regulation of rRNA expression (Rattus norvegicus)
B-WICH complex positively regulates rRNA expression (Rattus norvegicus)
B-WICH complex binds rDNA promoter (Rattus norvegicus)
B-WICH:rDNA Promoter:SL1:RNA Pol I [nucleoplasm] (Rattus norvegicus)
B-WICH [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
B-WICH recruits histone acetyltransferases (Rattus norvegicus)
B-WICH:rDNA Promoter:KAT2B:KAT2A:EP300 [nucleoplasm] (Rattus norvegicus)
B-WICH:rDNA Promoter:SL1:RNA Pol I [nucleoplasm] (Rattus norvegicus)
B-WICH [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
B-WICH:rDNA Promoter:SL1:RNA Pol I [nucleoplasm] (Rattus norvegicus)
B-WICH [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
B-WICH:histone acetyltransferase acetylates histone H3 at lysine-9 (Rattus norvegicus)
B-WICH:rDNA Promoter:KAT2B:KAT2A:EP300 [nucleoplasm] (Rattus norvegicus)
B-WICH:rDNA Promoter:SL1:RNA Pol I [nucleoplasm] (Rattus norvegicus)
B-WICH [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal B complex (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
U2 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
mRNA Splicing - Minor Pathway (Rattus norvegicus)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Rattus norvegicus)
ATAC C Complex [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Rattus norvegicus)
ATAC C Complex [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
Formation of AT-AC B Complex (Rattus norvegicus)
ATAC A Complex [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
ATAC B Complex [nucleoplasm] (Rattus norvegicus)
ATAC A Complex [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
Formation of AT-AC C complex (Rattus norvegicus)
ATAC B Complex [nucleoplasm] (Rattus norvegicus)
ATAC A Complex [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
ATAC C Complex [nucleoplasm] (Rattus norvegicus)
U12 snRNP [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Sf3b1 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:G3V7T6
Gene Names
Sf3b1
Reference Genes
BioGPS Gene:84486 Sf3b1
ENSEMBL:ENSRNOG00000013516
ENSEMBL:ENSRNOG00000013516.7 Sf3b1
KEGG Gene (Rattus norvegicus):84486 Sf3b1
Monarch:84486 Sf3b1
NCBI Gene:84486 Sf3b1
Reference Transcript
RefSeq:NM_053426.1 Sf3b1
Other Identifiers
10928122
1389840_at
1390234_at
17864633
5650456
5701522
5798350
5830140
5838050
5873984
5934241
6010943
6031471
6064559
6110412
6120360
6194481
6206438
6272083
6296321
6314598
6370437
6374220
6389176
6464090
6489361
6585486
6599533
6612873
6680365
6704390
6727760
6729971
6740335
6746730
84486
A_43_P15734
A_43_P18423
A_64_P111325
A_64_P142194
GE1268883
GE19098
GO:0000245
GO:0000398
GO:0003723
GO:0003729
GO:0005634
GO:0005654
GO:0005684
GO:0005686
GO:0005689
GO:0005694
GO:0005730
GO:0006351
GO:0006355
GO:0016071
GO:0016607
GO:0034693
GO:0043226
GO:0045945
GO:0065003
GO:0071005
GO:0071013
GO:0110016
GO:1990935
ILMN_1358274
PH_rn_0010324
rc_AI060207_at
Participates
as an input of
B-WICH complex binds rDNA promoter (Rattus norvegicus)
as a component of
B-WICH [nucleoplasm] (Rattus norvegicus)
SF3B [nucleoplasm] (Rattus norvegicus)
Inferred From
SF3B1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_445878.1
Ensembl
ENSRNOG00000013516
,
ENSRNOT00000019126
,
ENSRNOP00000019126
RGD
620148
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