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Col16a1 [endoplasmic reticulum lumen]
Stable Identifier
R-RNO-2173045
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
endoplasmic reticulum lumen
Synonyms
5Hyl-COL16A1, F1LND0
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Rattus norvegicus)
Collagen formation (Rattus norvegicus)
Collagen biosynthesis and modifying enzymes (Rattus norvegicus)
COLGALT1,COLGALT2 bind Lysyl hydroxylated collagen propeptides (Rattus norvegicus)
COLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Galactosylation of collagen propeptide hydroxylysines by PLOD3 (Rattus norvegicus)
PLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum membrane] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Galactosylation of collagen propeptide hydroxylysines by procollagen galactosyltransferases 1, 2. (Rattus norvegicus)
COLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides dissociate from Lysyl hydroxylases (Rattus norvegicus)
Lysyl hydroxylases:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
PLOD3 binds Lysyl hydroxylated collagen propeptides (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
PLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum membrane] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
Procollagen lysyl hydroxylases convert collagen lysines to 5-hydroxylysines (Rattus norvegicus)
Lysyl hydroxylases:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Col16a1 [endoplasmic reticulum lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:F1LND0
Gene Names
Col16a1
Reference Genes
BioGPS Gene:366474 Col16a1
ENSEMBL:ENSRNOG00000031475
ENSEMBL:ENSRNOG00000031475.5 Col16a1
ENSEMBL:ENSRNOG00000031475.5 Col16a1
Monarch:366474 Col16a1
NCBI Gene:366474 Col16a1
Reference Transcript
RefSeq:XM_006238947.3 Col16a1
Other Identifiers
10872394
1390846_at
17802515
366474
5618644
5621320
5634723
5644391
5650395
5652997
5659274
5663978
5682229
5687137
5697305
5706976
5740776
5772416
5778772
5817323
5821380
5878461
5881147
5913592
5925245
5935269
5959694
5983989
5985603
6010169
6037231
6053869
6056656
6058494
6061532
6066654
6070041
6094301
6113245
6122462
6132665
6142734
6179488
6225399
6252361
6309593
6324038
6332957
6333650
6348229
6354976
6357297
6365385
6366263
6372314
6372823
6374553
6441722
6451490
6455638
6473418
6481838
6495251
6529358
6536371
6549997
6559345
6589129
6609210
6622619
6624026
6629908
6638731
6647186
6669205
6692540
6709762
6719787
6720665
A_43_P16491
GE1269071
GO:0005178
GO:0007155
GO:0033622
GO:0033627
GO:0034330
GO:0051894
GO:0065003
GO:0071230
ILMN_1364416
PH_rn_0009906
Participates
as a candidate of
5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Rattus norvegicus)
Other forms of this molecule
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [endoplasmic reticulum lumen]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Col16a1 [extracellular region]
Inferred From
5Hyl-COL16A1 [endoplasmic reticulum lumen]
(Homo sapiens)
Modified Residues
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
XP_006239009.1
Ensembl
ENSRNOG00000031475
,
ENSRNOT00000067663
,
ENSRNOP00000058947
RGD
1310982
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