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Go!
Vcan [extracellular region]
Stable Identifier
R-RNO-2064142
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
extracellular region
Synonyms
C4S-VCAN, Q9ERB4
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Rattus norvegicus)
ECM proteoglycans (Rattus norvegicus)
Tenascins C, R, (X, N) bind lecticans (Rattus norvegicus)
Lecticans [extracellular region] (Rattus norvegicus)
Vcan [extracellular region] (Rattus norvegicus)
Tenascins C, R, (X, N):Lecticans [extracellular region] (Rattus norvegicus)
Lecticans [extracellular region] (Rattus norvegicus)
Vcan [extracellular region] (Rattus norvegicus)
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Chondroitin sulfate/dermatan sulfate metabolism (Rattus norvegicus)
CS/DS degradation (Rattus norvegicus)
DSPG and CSPG translocate to the lysosome for degradation (Rattus norvegicus)
CSPGs [extracellular region] (Rattus norvegicus)
C4S-PGs [extracellular region] (Rattus norvegicus)
Vcan [extracellular region] (Rattus norvegicus)
Chondroitin sulfate biosynthesis (Rattus norvegicus)
CSPG is secreted (Rattus norvegicus)
CSPGs [extracellular region] (Rattus norvegicus)
C4S-PGs [extracellular region] (Rattus norvegicus)
Vcan [extracellular region] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q9ERB4
Gene Names
Vcan
Reference Genes
BioGPS Gene:114122 Vcan
ENSEMBL:ENSRNOG00000029212
ENSEMBL:ENSRNOG00000029212.7 Vcan
KEGG Gene (Rattus norvegicus):114122 Vcan
Monarch:114122 Vcan
NCBI Gene:114122 Vcan
UCSC:Q9ERB4 Vcan
Reference Transcript
RefSeq:NM_001170559.1 Vcan
RefSeq:NM_001170558.1 Vcan
RefSeq:NM_001170560.1 Vcan
Other Identifiers
10820282
114122
1371232_a_at
1388054_a_at
1388142_at
17744073
5666644
5695019
5717571
5752397
5844050
5848845
5856436
5896111
6028288
6191434
6252409
6266293
6283220
6525035
6682718
AF072892_s_at
A_44_P1017144
A_44_P158798
A_64_P065091
GE1116696
GO:0001501
GO:0001657
GO:0001750
GO:0002052
GO:0005509
GO:0005540
GO:0005576
GO:0005615
GO:0005929
GO:0007155
GO:0007417
GO:0007507
GO:0008347
GO:0009986
GO:0010001
GO:0019903
GO:0030154
GO:0030169
GO:0030246
GO:0030312
GO:0031012
GO:0031103
GO:0033165
GO:0042995
GO:0043226
GO:0045202
GO:0048856
GO:0048870
GO:0062023
GO:0072534
GO:0110165
ILMN_1373952
PH_rn_0009378
PH_rn_0023285
Participates
as a member of
Lecticans [extracellular region] (Rattus norvegicus)
C4S-PGs [extracellular region] (Rattus norvegicus)
Other forms of this molecule
Vcan [lysosomal lumen]
Vcan [lysosomal lumen]
Vcan [lysosomal lumen]
Vcan [lysosomal lumen]
Vcan [lysosomal lumen]
Vcan [lysosomal lumen]
Vcan [lysosomal lumen]
Vcan [extracellular region]
Vcan [extracellular region]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [extracellular region]
Vcan [extracellular region]
Vcan [endoplasmic reticulum lumen]
phospho-Vcan [endoplasmic reticulum lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [Golgi lumen]
Vcan [extracellular region]
Inferred From
Versican [extracellular region]
(Homo sapiens)
C4S-VCAN [extracellular region]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63513) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001164030.1
,
NP_001164029.1
,
NP_001164031.1
Ensembl
ENSRNOT00000063821
,
ENSRNOP00000062961
,
ENSRNOG00000029212
RGD
619940
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