Reactome | Col4a1 [extracellular region]

Col4a1 [extracellular region]

Stable Identifier

R-MMU-2682381

Type

Protein [EntityWithAccessionedSequence]

Species

Mus musculus

Compartment

extracellular region

Synonyms

3,4-Hyp 5-sulfiliminyl collagen alpha-1(IV) chain, P02463

Locations in the PathwayBrowser

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Extracellular matrix organization (Mus musculus)

- Collagen formation (Mus musculus)
  - Assembly of collagen fibrils and other multimeric structures (Mus musculus)
    - Crosslinking of collagen fibrils (Mus musculus)
      - Collagen type IV sulfilimine cross-linking by peroxidasin (Mus musculus)
        
        Collagen type IV networks with sulfilimine cross-links [extracellular region] (Mus musculus)
        
        Sulfilimine-containing collagen type IV alpha1.alpha1.alpha2 network [extracellular region] (Mus musculus)
        
        Tropocollagen alpha-1(IV).alpha-1(IV).alpha-2(IV) with or without sulfiliminyl cross-links [extracellular region] (Mus musculus)
        
        Sulfiliminyl tropocollagen alpha-1(IV).alpha-1(IV).alpha-2(IV) [extracellular region] (Mus musculus)
        
        Col4a1 [extracellular region] (Mus musculus)
        
        Sulfilimine-containing collagen type IV alpha1.alpha2.alpha5.alpha6 network [extracellular region] (Mus musculus)
        
        Collagen type IV alpha1.alpha2.alpha5.alpha6 tropocollagens with or without sulfilimine cross-links [extracellular region] (Mus musculus)
        
        Tropocollagen alpha-1(IV).alpha-1(IV).alpha-2(IV) with or without sulfiliminyl cross-links [extracellular region] (Mus musculus)
        
        Sulfiliminyl tropocollagen alpha-1(IV).alpha-1(IV).alpha-2(IV) [extracellular region] (Mus musculus)
        
        Col4a1 [extracellular region] (Mus musculus)

External Reference Information

External Reference

UniProt:P02463 Col4a1

Gene Names

Col4a1

Chain

signal peptide:1-27, propeptide:28-172, chain:173-1669, chain:1445-1669

Reference Genes

BioGPS Gene:12826 Col4a1

KEGG:mmu:12826 Col4a1

Monarch:12826 Col4a1

NCBI Gene:12826 Col4a1

UCSC:P02463 Col4a1

Reference Transcript

RefSeq:NM_009931.2 Col4a1

Other Identifiers

101093_at

10576973

12826

1426348_at

1452035_at

17507377

4343349

4348935

4357993

4377586

4413672

4436134

4451462

4453602

4457238

4504591

4564513

4576519

4597318

4627367

4631010

4637970

4638552

4642998

4664342

4684337

4702847

4722989

4758449

4760056

4798831

4842375

4844921

4848647

4884839

4885162

4920506

4923221

4937833

4948465

4951623

4962014

4964442

4973188

5001223

5023144

5059139

5089825

5091712

5125333

5192799

5194685

5207584

5211878

5222010

5242774

5258832

5273533

5312525

5332895

5336947

5339942

5340655

5342664

5349837

5382660

5412453

5415690

5436099

5458570

5470715

5487434

5493668

5496121

5503915

5506542

5542350

5547602

5550483

A_51_P124254

A_52_P448994

A_52_P518827

GE42447

GO:0001525

GO:0001569

GO:0005198

GO:0005201

GO:0005576

GO:0005581

GO:0005587

GO:0005604

GO:0005615

GO:0007420

GO:0007528

GO:0016020

GO:0030020

GO:0030154

GO:0030198

GO:0030312

GO:0030855

GO:0031012

GO:0034330

GO:0038063

GO:0048407

GO:0048514

GO:0048856

GO:0061304

GO:0061333

GO:0062023

GO:0071230

GO:0071711

ILMN_2621643

j04694_s_at

mMC014303

Participates

as a component of

Sulfiliminyl tropocollagen alpha-1(IV).alpha-1(IV).alpha-2(IV) [extracellular region] (Mus musculus)

Other forms of this molecule

Col4a1 [endoplasmic reticulum lumen]

Col4a1 [extracellular region]

Inferred From

Sulfiliminyl collagen alpha-1(IV) chains [extracellular region] (Homo sapiens)

3,4-Hyp 5-sulfiliminyl collagen alpha-1(IV) chain [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

(2S,5R)-5-hydroxylysine (sulfilimine bond) at unknown position

Modification

sulfilimine bond

PsiMod Name

(2S,5R)-5-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.

Cross References

RefSeq

NP_034061.2

ENSEMBL

ENSMUST00000033898, ENSMUSP00000033898

PRO

P02463

GlyGen

P02463

MGI

88454