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GPATCH1 [nucleoplasm]
Stable Identifier
R-HSA-9770419
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
G patch domain-containing protein 1, GPTC1_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal B* complex (Homo sapiens)
GPATCH1 [nucleoplasm] (Homo sapiens)
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
GPATCH1 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal C complex containing intron lariat (Homo sapiens)
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
GPATCH1 [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
GPATCH1 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal C* complex (Homo sapiens)
GPATCH1 [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
GPATCH1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9BRR8 GPATCH1
Gene Names
GPATCH1, ECGP, GPATC1
Chain
initiator methionine:1, chain:2-931
Reference Genes
BioGPS Gene:55094 GPATCH1
COSMIC (genes):GPATCH1 GPATCH1
CTD Gene:55094 GPATCH1
dbSNP Gene:55094 GPATCH1
ENSEMBL:ENSG00000076650 GPATCH1
HGNC:24658 GPATCH1
KEGG:hsa:55094 GPATCH1
Monarch:55094 GPATCH1
NCBI Entrez Gene:55094 GPATCH1
UCSC:Q9BRR8 GPATCH1
Reference Transcript
RefSeq:NM_018025.2 GPATCH1
Other Identifiers
11730884_a_at
16860587
219818_PM_s_at
219818_s_at
3829159
3829175
3829176
3829177
3829178
3829179
3829180
3829181
3829183
3829184
3829185
3829186
3829187
3829188
3829189
3829190
3829191
3829192
3829193
3829194
3829195
3829196
3829198
3829199
3829200
3829201
3829202
3829203
3829204
3829205
3829206
51829_at
52644_at
55094
8027521
A_14_P104569
A_23_P27822
GE55688
GO:0000398
GO:0003676
GO:0003723
GO:0005634
GO:0005654
GO:0006397
GO:0016071
GO:0071013
HMNXSV003039768
HMNXSV003055858
ILMN_1655625
PH_hs_0003610
TC19000432.hg
g8922282_3p_s_at
Participates
as an input of
Formation of the Spliceosomal B* complex (Homo sapiens)
as a component of
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
as an output of
Formation of the Spliceosomal C* complex (Homo sapiens)
Inferred To
GPATCH1 [nucleoplasm]
(Bos taurus)
GPATCH1 [nucleoplasm]
(Canis familiaris)
GPATCH1 [nucleoplasm]
(Dictyostelium discoideum)
GPATCH1 [nucleoplasm]
(Drosophila melanogaster)
GPATCH1 [nucleoplasm]
(Gallus gallus)
GPATCH1 [nucleoplasm]
(Schizosaccharomyces pombe)
GPATCH1 [nucleoplasm]
(Sus scrofa)
Ghost homologue of GPATCH1 [nucleoplasm]
(Danio rerio)
Ghost homologue of GPATCH1 [nucleoplasm]
(Plasmodium falciparum)
Gpatch1 [nucleoplasm]
(Mus musculus)
Gpatch1 [nucleoplasm]
(Rattus norvegicus)
gpch-1 [nucleoplasm]
(Caenorhabditis elegans)
gpatch1 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
NP_060495.2
ENSEMBL
ENSP00000170564
,
ENST00000170564
,
ENSG00000076650
OpenTargets
ENSG00000076650
GeneCards
GPATCH1
HPA
ENSG00000076650-GPATCH1
PRO
Q9BRR8
Pharos - Targets
Q9BRR8
GlyGen
Q9BRR8
Interactors (12)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9BRX9 WDR83
1
WDR83 [endosome membrane]
(R-HSA-5672942)
0.643
5
UniProt:Q15029 EFTUD2
1
EFTUD2 [nucleoplasm]
(R-HSA-71883)
0.615
4
UniProt:Q56P03 EAPP
0.527
2
UniProt:Q9BQ65 USB1
0.527
4
UniProt:Q96AT1 K1143
0.527
2
UniProt:P63162 SNRPN
1
Me2-R108,R112-SNRPN [nucleoplasm]
(R-HSA-8865931)
0.527
3
UniProt:Q9UMS4 PRPF19
1
PRPF19 [nucleoplasm]
(R-HSA-5420907)
0.527
3
UniProt:Q8TBK6 ZCH10
0.527
2
UniProt:O95926 SYF2
1
SYF2 [nucleoplasm]
(R-HSA-8867884)
0.527
3
UniProt:P62304 SNRPE
2
SNRPE [cytosol]
(R-HSA-191782)
SNRPE [nucleoplasm]
(R-HSA-71905)
0.527
4
UniProt:P62306 SNRPF
2
SNRPF [cytosol]
(R-HSA-191852)
SNRPF [nucleoplasm]
(R-HSA-71907)
0.527
3
UniProt:Q9BW85 YJU2
1
YJU2 [nucleoplasm]
(R-HSA-9770430)
0.527
2
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