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C9orf78 [nucleoplasm]
Stable Identifier
R-HSA-9769588
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
fullName evidence="1"Telomere length and silencing protein 1 homolog, TLS1_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal P complex and exon ligation (Homo sapiens)
C9orf78 [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
C9orf78 [nucleoplasm] (Homo sapiens)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
C9orf78 [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
C9orf78 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9NZ63 C9orf78
Gene Names
C9orf78, HCA59
Chain
chain:1-289
Reference Genes
BioGPS Gene:51759 C9orf78
COSMIC (genes):C9orf78 C9orf78
CTD Gene:51759 C9orf78
dbSNP Gene:51759 C9orf78
ENSEMBL:ENSG00000136819 C9orf78
HGNC:24932 C9orf78
KEGG:hsa:51759 C9orf78
Monarch:51759 C9orf78
NCBI Gene:51759 C9orf78
OMIM:619569 C9orf78
UCSC:Q9NZ63 C9orf78
Reference Transcript
RefSeq:NM_016520.2 C9orf78
Other Identifiers
11721829_at
17099095
218116_PM_at
218116_at
3227122
3227123
3227124
3227125
3227126
3227127
3227128
3227129
3227130
3227131
3227132
3227134
3227135
3227136
3227137
3227138
3227139
3227141
3227142
51759
54116_at
8164596
91462_at
A_23_P9443
GE63351
GE82133
GO:0000398
GO:0000775
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005694
GO:0005829
GO:0006397
GO:0007059
GO:0008380
GO:0016071
GO:0030623
GO:0043226
GO:0045292
GO:0060629
HMNXSV003049059
ILMN_1697166
PH_hs_0014276
PH_hs_0038708
TC09001655.hg
g7706556_3p_at
Participates
as an input of
Formation of the Spliceosomal P complex and exon ligation (Homo sapiens)
as an output of
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
as a component of
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
Inferred To
C9H9orf78 [nucleoplasm]
(Canis familiaris)
C9orf78 [nucleoplasm]
(Caenorhabditis elegans)
C9orf78 [nucleoplasm]
(Dictyostelium discoideum)
C9orf78 [nucleoplasm]
(Gallus gallus)
C9orf78 [nucleoplasm]
(Mus musculus)
C9orf78 [nucleoplasm]
(Plasmodium falciparum)
Dmel\CG7974 [nucleoplasm]
(Drosophila melanogaster)
tls1 [nucleoplasm]
(Schizosaccharomyces pombe)
DKEY-226M8.1 [nucleoplasm]
(Danio rerio)
C1H9orf78 [nucleoplasm]
(Sus scrofa)
C3h9orf78 [nucleoplasm]
(Rattus norvegicus)
C11H9orf78 [nucleoplasm]
(Bos taurus)
c8h9orf78 [nucleoplasm]
(Xenopus tropicalis)
Cross References
ENSEMBL
ENSG00000136819
,
ENSP00000361524
,
ENST00000372447
OpenTargets
ENSG00000136819
GeneCards
C9orf78
HPA
ENSG00000136819-C9orf78
PRO
Q9NZ63
Pharos - Targets
Q9NZ63
GlyGen
Q9NZ63
PDB
7OS2
,
9FMD
,
8C6J
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9H0C5 BTBD1
1
BTBD1 [cytosol]
(R-HSA-8851650)
0.527
2
UniProt:Q9NYB0 TERF2IP
1
TERF2IP [nucleoplasm]
(R-HSA-174873)
0.508
2
UniProt:O75152 ZC3H11A
1
ZC3H11A [nucleoplasm]
(R-HSA-8850659)
0.483
2
UniProt:Q15029 EFTUD2
1
EFTUD2 [nucleoplasm]
(R-HSA-71883)
0.483
2
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