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miR-224 binds NPAS4 mRNA
Stable Identifier
R-HSA-9768788
Type
Reaction [binding]
Species
Homo sapiens
Compartment
cytosol
ReviewStatus
5/5
Locations in the PathwayBrowser
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Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
Generic Transcription Pathway (Homo sapiens)
Transcriptional Regulation by NPAS4 (Homo sapiens)
Regulation of NPAS4 gene expression (Homo sapiens)
Regulation of NPAS4 mRNA translation (Homo sapiens)
miR-224 binds NPAS4 mRNA (Homo sapiens)
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Three putative miR-224 binding sites exist in the 3'UTR of NPAS4 mRNA, which is highly conserved (>95% identity between mouse, rat and human over 700 bp sequence). miR-224 was shown to downregulate expression from the NPAS4 3'UTR reporter and to downregulate human NPAS4 at both mRNA and protein levels (Bersten et al. 2014), suggesting that it forms an endonucleolytic RISC, although the existence of non-endonucleolytic miR-224 RISC has not been excluded. Expression of mouse Npas4 is downregulated by mouse miR-224 (Choy et al. 2017). In both the human and mouse genome, the miR-224 gene locus is found within the sixth intron of the GABRE gene on the X chromosome, which encodes the GABA receptor epsilon subunit. GABRE and miR-224 tend to be coexpressed (Bersten et al. 2014).
Literature References
PubMed ID
Title
Journal
Year
24291638
Regulation of the neuronal transcription factor NPAS4 by REST and microRNAs
Whitelaw, ML
,
McCarthy, PJ
,
Bersten, DC
,
Wright, JA
Biochim Biophys Acta
2014
Participants
Input
miR-224-5p RISC [cytosol]
(Homo sapiens)
NPAS4 mRNA [cytosol]
(Homo sapiens)
Output
NPAS4 mRNA:miR-224-5p RISC [cytosol]
(Homo sapiens)
Participates
as an event of
Regulation of NPAS4 mRNA translation (Homo sapiens)
Authored
Orlic-Milacic, M (2022-04-08)
Reviewed
Lin, Y (2022-07-29)
Created
Orlic-Milacic, M (2022-03-14)
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