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SPOCD1 [nucleoplasm]
Stable Identifier
R-HSA-9727464
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
SPOC domain-containing protein 1, SPOC1_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
Epigenetic regulation of gene expression (Homo sapiens)
Regulation of endogenous retroelements (Homo sapiens)
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs) (Homo sapiens)
DNMT3A:DNMT3L in nascent RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L methylates cytosine in DNA (Homo sapiens)
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
SPOCD1 [nucleoplasm] (Homo sapiens)
PIWIL4:piRNA binds nascent LINE1 pre-RNA and recruits SPOCD1, C19ORF84, DNMT3A, DNMT3L, the NURD complex, and the BAF complex (Homo sapiens)
SPOCD1 [nucleoplasm] (Homo sapiens)
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
SPOCD1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q6ZMY3 SPOCD1
Gene Names
SPOCD1
Chain
chain:1-1216
Reference Genes
BioGPS Gene:90853 SPOCD1
COSMIC (genes):SPOCD1 SPOCD1
CTD Gene:90853 SPOCD1
dbSNP Gene:90853 SPOCD1
ENSEMBL:ENSG00000134668 SPOCD1
HGNC:26338 SPOCD1
Monarch:90853 SPOCD1
NCBI Gene:90853 SPOCD1
OMIM:619038 SPOCD1
UCSC:Q6ZMY3 SPOCD1
Reference Transcript
RefSeq:XM_011542414.2 SPOCD1
RefSeq:NM_144569.5 SPOCD1
RefSeq:NM_001281987.1 SPOCD1
RefSeq:XM_011542413.2 SPOCD1
RefSeq:NM_001281988.1 SPOCD1
Other Identifiers
11728524_a_at
1562415_PM_a_at
1562415_a_at
16684581
235417_PM_at
235417_at
2404773
2404774
2404775
2404776
2404777
2404778
2404780
2404781
2404782
2404783
2404784
2404785
2404786
2404787
2404788
2404789
2404790
2404791
2404792
2404793
2404794
2404795
2404796
2404797
2404798
2404799
2404800
2404801
2404802
2404804
2404806
2404807
2404808
2404809
57667_at
7914467
89672_s_at
90853
A_23_P431388
A_24_P932887
GE527975
GO:0005515
GO:0005634
GO:0005694
GO:0006325
GO:0006351
GO:0007283
GO:0022414
GO:0030154
GO:0031047
GO:0043226
GO:0141006
HMNXSV003029576
Hs.62604.0.A1_3p_at
Hs2.364165.2.S1_3p_x_at
ILMN_1784948
PH_hs_0003946
TC01002459.hg
Participates
as an input of
PIWIL4:piRNA binds nascent LINE1 pre-RNA and recruits SPOCD1, C19ORF84, DNMT3A, DNMT3L, the NURD complex, and the BAF complex (Homo sapiens)
as a component of
nascent LINE-1 RNA transcript:MeR-PIWIL4:2'-O-methyl-piRNA:SPOCD1:DNMT3A:DNMT3L [nucleoplasm] (Homo sapiens)
Cross References
ENSEMBL
ENSP00000435851
,
ENST00000257100
,
ENST00000533231
,
ENSP00000353670
,
ENSP00000257100
,
ENST00000360482
OpenTargets
ENSG00000134668
HPA
ENSG00000134668-SPOCD1
PRO
Q6ZMY3
Pharos - Targets
Q6ZMY3
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