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Replication of the SARS-CoV-1 genome
Stable Identifier
R-HSA-9682706
Type
Pathway
Species
Homo sapiens
Related Species
Human SARS coronavirus
ReviewStatus
5/5
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Disease (Homo sapiens)
Infectious disease (Homo sapiens)
Viral Infection Pathways (Homo sapiens)
SARS-CoV Infections (Homo sapiens)
SARS-CoV-1 Infection (Homo sapiens)
SARS-CoV-1 Genome Replication and Transcription (Homo sapiens)
Replication of the SARS-CoV-1 genome (Homo sapiens)
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The plus strand RNA genome of the human SARS coronavirus 1 (SARS-CoV-1) is replicated by the viral replication-transcription complex (RTC) composed of nonstructural proteins nsp3-nsp16, encoded by open reading frames ORF1a and ORF1b. Two RTC proteins, nsp8 and nsp12, possess 5'-3' RNA-dependent RNA polymerase activity. nsp12 is the main RNA polymerase, while nsp8 is thought to act as an RNA primase. nsp14 acts as a 3'-5' exonuclease, increasing the fidelity of the RTC. nsp14 also has the RNA capping activity and, in concert with nsp16, it caps viral plus strand and minus strand genomic and subgenomic RNAs, which confers stability to viral RNAs by enabling them to escape interferon-mediated innate immune responses of the host. nsp13 is an RNA helicase which is thought to melt secondary structures in the genomic RNA during replication and transcription. The plus strand genomic RNA is first used to synthesize the minus strand genomic RNA complement, which is subsequently used as a template for synthesis of plus strand viral RNA genomes that are packaged into mature virions. For review, please refer to Yang and Leibowitz 2015, Snijder et al. 2016, Fung and Liu 2019.
Literature References
PubMed ID
Title
Journal
Year
27712628
The Nonstructural Proteins Directing Coronavirus RNA Synthesis and Processing
Ziebuhr, J
,
Snijder, EJ
,
Decroly, E
Adv. Virus Res.
2016
31226023
Human Coronavirus: Host-Pathogen Interaction
Fung, TS
,
Liu, DX
Annu. Rev. Microbiol.
2019
25736566
The structure and functions of coronavirus genomic 3' and 5' ends
Leibowitz, JL
,
Yang, D
Virus Res.
2015
Participants
Events
Replication transcription complex binds SARS-CoV-1 genomic RNA
(Homo sapiens)
nsp13 helicase melts secondary structures in SARS-CoV-1 genomic RNA template
(Homo sapiens)
nsp8 generates RNA primers
(Homo sapiens)
nsp12 synthesizes minus strand SARS-CoV-1 genomic RNA complement
(Homo sapiens)
nsp12 misincorporates a nucleotide in nascent RNA minus strand
(Homo sapiens)
SARS coronavirus gRNA:RTC:RNA primer binds RTC inhibitors
(Homo sapiens)
nsp14 acts as a 3'-to-5' exonuclease to remove misincorporated nucleotides from nascent RNA
(Homo sapiens)
RTC completes synthesis of the minus strand genomic RNA complement
(Homo sapiens)
SARS-CoV-1 gRNA:RTC:nascent RNA minus strand binds RTC inhibitors
(Homo sapiens)
nsp14 acts as a cap N7 methyltransferase to modify SARS-CoV-1 gRNA complement (minus strand)
(Homo sapiens)
nsp16 acts as a cap 2'-O-methyltransferase to modify SARS-CoV-1 gRNA complement (minus strand)
(Homo sapiens)
RTC binds SARS-CoV-1 genomic RNA complement (minus strand)
(Homo sapiens)
RTC synthesizes SARS-CoV-1 plus strand genomic RNA
(Homo sapiens)
SARS-CoV-1 gRNA complement (minus strand):RTC binds RTC inhibitors
(Homo sapiens)
nsp14 acts as a cap N7 methyltransferase to modify SARS-CoV-1 gRNA (plus strand)
(Homo sapiens)
nsp16 acts as a cap 2'-O-methyltransferase to modify SARS-CoV-1 gRNA (plus strand)
(Homo sapiens)
Polyadenylation of SARS-CoV-1 genomic RNA (plus strand)
(Homo sapiens)
ZCRB1 binds 5'UTR of SARS-CoV-1 genomic RNA
(Homo sapiens)
nsp13 binds DDX5
(Homo sapiens)
nsp15 binds RB1
(Homo sapiens)
nsp16 binds VHL
(Homo sapiens)
Participates
as an event of
SARS-CoV-1 Genome Replication and Transcription (Homo sapiens)
Disease
Name
Identifier
Synonyms
severe acute respiratory syndrome
DOID:2945
SARS-CoV infection, SARS
Authored
Orlic-Milacic, M (2020-04-30)
Reviewed
Acencio, ML (2020-05-27)
Mazein, A (2020-05-27)
Created
Orlic-Milacic, M (2020-04-13)
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