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NPAS4:ARNT2 binds BDNF gene promoter
Stable Identifier
R-HSA-9644879
Type
Reaction [binding]
Species
Homo sapiens
Compartment
nucleoplasm
ReviewStatus
5/5
Locations in the PathwayBrowser
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Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
Generic Transcription Pathway (Homo sapiens)
Transcriptional Regulation by NPAS4 (Homo sapiens)
NPAS4 regulates expression of target genes (Homo sapiens)
NPAS4:ARNT2 binds BDNF gene promoter (Homo sapiens)
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Based on in vitro studies, human NPAS4 in complex with human ARTN2 binds to promoters I and IV of the BDNF gene (Pruunsild et al. 2011). In mouse neurons, it was shown that endogenous Npas4 binds promoters I and IV of the endogenous mouse Bdnf gene (Lin et al. 2008, Bloodgood et al. 2013), as well as intron III (Bloodgood et al. 2013). The NPAS4:ARNT2 complex is shown as a set member, while NPAS4:ARNT and NPAS4:ARNTL are shown as set candidates in the context of binding to the BDNF gene promoter.
Literature References
PubMed ID
Title
Journal
Year
21368041
Identification of cis-elements and transcription factors regulating neuronal activity-dependent transcription of human BDNF gene
Orav, E
,
Timmusk, T
,
Koppel, I
,
Pruunsild, P
,
Sepp, M
J. Neurosci.
2011
Participants
Input
BDNF gene [nucleoplasm]
(Homo sapiens)
NPAS4:ARNT2,(NPAS4:ARNT,NPAS4:ARNTL) [nucleoplasm]
(Homo sapiens)
Output
NPAS4:ARNT2,(NPAS4:ARNT,NPAS4:ARNTL):BDNF gene [nucleoplasm]
(Homo sapiens)
Participates
as an event of
NPAS4 regulates expression of target genes (Homo sapiens)
Authored
Orlic-Milacic, M (2022-04-08)
Reviewed
Lin, Y (2022-07-29)
Created
Orlic-Milacic, M (2019-04-26)
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