Reactome | K63polyUb-RIPK1 [cytosol]

K63polyUb-RIPK1

Stable Identifier

R-HSA-937021

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

cytosol

Synonyms

K63polyUb-RIP1, K63-linked polyUb - RIP1

Locations in the PathwayBrowser

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Literature References

PubMed ID	Title	Journal	Year
16603398	Activation of IKK by TNFalpha requires site-specific ubiquitination of RIP1 and polyubiquitin binding by NEMO Ea, CK, Deng, L, Xia, ZP, Pineda, G, Chen, ZJ	Mol Cell	2006

External Reference Information

External Reference

UniProt:Q13546 RIPK1

Gene Names

RIPK1, RIP, RIP1

Chain

chain:1-671

Reference Genes

BioGPS Gene:8737 RIPK1

COSMIC (genes):RIPK1 RIPK1

CTD Gene:8737 RIPK1

dbSNP Gene:8737 RIPK1

ENSEMBL:ENSG00000137275 RIPK1

HGNC:10019 RIPK1

KEGG Gene (Homo sapiens):hsa:8737 RIPK1

Monarch:8737 RIPK1

NCBI Gene:8737 RIPK1

OMIM:603453 RIPK1

UCSC:Q13546 RIPK1

Reference Transcript

Other Identifiers

0006520154

10302

11737938_a_at

11737939_a_at

11737940_s_at

11750849_a_at

11756807_a_at

15257

17004295

209941_at

226551_at

2892345

2892349

2892350

2892352

2892355

2892356

2892357

2892358

2892359

2892363

2892364

2892372

2892373

2892375

2892376

2892377

2892378

2892379

2892383

2892385

2892386

2892387

2892388

40696_at

475_at

4ITH

4ITI

4ITJ

4NEU

51161_at

5HX6

5TX5

8116622

8737

A0A024QZU0

A_23_P370005

A_33_P3279059

AAC32232

AAC50137

AAI26255

AAI26257

AAT74626

AB208926

AK304701

AK314176

AL031963

AY682848

BAD92163

BAG36858

BAG65471

BC126254

BC126256

CAB010302

CAD70625

CCDS4482

CH471087

EAW55115

EAW55117

ENSG00000137275

ENSP00000259808

ENSP00000369773

ENST00000259808

ENST00000380409

EntrezGene:8737

g3426026_3p_at

GO:0000166

GO:0001934

GO:0002376

GO:0002756

GO:0003674

GO:0004672

GO:0004674

GO:0004871

GO:0005123

GO:0005515

GO:0005524

GO:0005575

GO:0005622

GO:0005623

GO:0005737

GO:0005739

GO:0005768

GO:0005829

GO:0005886

GO:0006461

GO:0006464

GO:0006468

GO:0006810

GO:0006915

GO:0006919

GO:0006950

GO:0007165

GO:0007249

GO:0007257

GO:0008150

GO:0008219

GO:0009056

GO:0009058

GO:0010008

GO:0010803

GO:0010940

GO:0010942

GO:0012501

GO:0016020

GO:0016032

GO:0016301

GO:0016310

GO:0016579

GO:0016740

GO:0019899

GO:0022607

GO:0030154

GO:0031264

GO:0031410

GO:0031625

GO:0032757

GO:0032760

GO:0033209

GO:0034138

GO:0034612

GO:0034641

GO:0035666

GO:0036289

GO:0042327

GO:0042802

GO:0043065

GO:0043068

GO:0043123

GO:0043124

GO:0043167

GO:0043226

GO:0043234

GO:0043235

GO:0043410

GO:0044257

GO:0044403

GO:0044877

GO:0045121

GO:0045651

GO:0045944

GO:0046330

GO:0046777

GO:0048856

GO:0051092

GO:0051260

GO:0051291

GO:0055085

GO:0060544

GO:0060545

GO:0065003

GO:0070231

GO:0070266

GO:0070513

GO:0070926

GO:0071356

GO:0071363

GO:0071550

GO:0097190

GO:0097191

GO:0097296

GO:0097342

GO:0097343

GO:0097527

GO:1901026

GO:1902041

GO:1902042

GO:1905206

GO:1990000

GO:2000377

GO:2000379

GO:2001237

GO:2001238

GO:2001240

HGNC:10019

HPA015257

Hs.77273.1.A1_3p_at

Hs.77273.1.A1_3p_x_at

ILMN_1657937

ILMN_2119535

IPR000488

IPR000719

IPR001245

IPR008271

IPR011009

IPR011029

IPR025735

NM_001317061

NM_001354930

NM_003804

NP_001303990

NP_001341859

NP_003795

PF00531

PF07714

PF12721

PH_hs_0018906

PR00109

RIPK1

RIPK1-201

RIPK1-202

SM00005

SM00220

TC06000023.hg

TC06002463.hg

U25994

U50062

U50062_at

uc003mux.4

uc063llv.1

UPI000000DC95

XM_005249457

XM_017011403

XP_005249514

XP_016866892

Participant Of

hasMember

K63polyUb-TRAF2,K63polyUb-TRAF6,K63polyUb-RIPK1,K63polyUb-IKBKG [cytosol]

hasComponent

Other forms of this molecule

K48polyUb-RIPK1 [cytosol]

PolyUb-RIPK1 [cytosol]

RIPK1 [cytosol]

RIPK1(325-671) [cytosol]

RIPK1 [endosome membrane]

K63pUb-K377-RIP1 [cytosol]

RIPK1(1-324) [cytosol]

p-S-RIPK1 [cytosol]

Inferred To

K63pUb-K377-RIP1 [cytosol] (Canis familiaris)

K63pUb-K377-RIP1 [cytosol] (Danio rerio)

K63pUb-K377-RIP1 [cytosol] (Rattus norvegicus)

K63pUb-K377-RIP1 [cytosol] (Xenopus tropicalis)

K63polyUb-RIPK1 [cytosol] (Bos taurus)

K63polyUb-RIPK1 [cytosol] (Gallus gallus)

K63polyUb-RIPK1 [cytosol] (Mus musculus)

K63polyUb-RIPK1 [cytosol] (Sus scrofa)

K63polyUb-RIPK1 [cytosol] (Taeniopygia guttata)

Homologues of K63polyUb-RIPK1 [cytosol] (Gallus gallus)

Homologues of K63polyUb-RIPK1 [cytosol] (Sus scrofa)

Modified Residues

Name

ubiquitinylated lysine (K63-polyubiquitin [cytosol]) at 377

Coordinate

377

Modification

K63polyUb [cytosol]

PsiMod Name

ubiquitinylated lysine [MOD:01148]

PsiMod Definition

A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a ubiquitin.

Cross References

RefSeq

XP_005249514.2, NP_003795.2

ZINC - World Drugs

RIPK1_HUMAN

ZINC - FDA approved

RIPK1_HUMAN

ZINC - Substances

RIPK1_HUMAN

GeneCards

Q13546

DOCK Blaster

5HX6, 4NEU, 4ITI, 4ITH, 4ITJ

ZINC target

Q13546

PRO

Q13546

BRENDA (Homo sapiens)

2.7.11.1

ZINC - Predictions - Purchasable

RIPK1_HUMAN

HMDB Protein

HMDBP09499

PDB

4NEU, 5HX6, 4ITH, 5TX5, 6C4D, 4ITI, 4ITJ, 6C3E

Interactors (21)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q14790 CASP8	8	CASP8(1-216) [cytosol] (R-HSA-933456) CASP8(375-384) [cytosol] (R-HSA-933460) CASP8(1-374) [cytosol] (R-HSA-3465404) CASP8(217-374) [mitochondrial outer membrane] (R-HSA-351869) CASP8(385-479) [mitochondrial outer membrane] (R-HSA-351828) CASP8(1-479) [cytosol] (R-HSA-57031) CASP8(385-479) [cytosol] (R-HSA-76158) CASP8(217-374) [cytosol] (R-HSA-75975)	0.956	29
UniProt:Q9Y572 RIPK3	2	RIPK3 [cytosol] (R-HSA-450328) p-S199,227-RIPK3 [cytosol] (R-HSA-5218873)	0.949	26
UniProt:Q13546 RIPK1	9	PolyUb-RIPK1 [cytosol] (R-HSA-6783197) K48polyUb-RIPK1 [cytosol] (R-HSA-6783308) RIPK1 [cytosol] (R-HSA-168651) RIPK1(325-671) [cytosol] (R-HSA-5212671) RIPK1 [endosome membrane] (R-HSA-450326) K63polyUb-RIPK1 [cytosol] (R-HSA-937021) K63pUb-K377-RIP1 [cytosol] (R-HSA-5212672) RIPK1(1-324) [cytosol] (R-HSA-5212664) p-S-RIPK1 [cytosol] (R-HSA-5218872)	0.886	10
UniProt:Q9Y6K9 IKBKG	12	IKBKG [nucleoplasm] (R-HSA-4755413) SUMO1-K277,K309-IKBKG [nucleoplasm] (R-HSA-4755449) IKBKG D406V [cytosol] (R-HSA-5262943) IKBKG L153R [cytosol] (R-HSA-5262879) IKBKG E391* [cytosol] (R-HSA-5262924) IKBKG C417R [cytosol] (R-HSA-5262858) IKBKG R173G [cytosol] (R-HSA-5262966) IKBKG R175P [cytosol] (R-HSA-5262916) IKBKG 420Wro447 [cytosol] (R-HSA-5262978) Ub-285-IKBKG [cytosol] (R-HSA-741397) K63polyUb-NEMO [cytosol] (R-HSA-202530) IKBKG [cytosol] (R-HSA-168108)	0.858	8
UniProt:P19438 TNFRSF1A	3	TNFRSF1A [plasma membrane] (R-HSA-5675738) TNFRSF1A(41-201) [extracellular region] (R-HSA-6785048) TNFRSF1A(22-455) [plasma membrane] (R-HSA-66344)	0.839	6
UniProt:P01375 TNF	5	TNF(1-34) [plasma membrane] (R-HSA-8863367) TNF(52-76) [extracellular region] (R-HSA-8863375) TNF(1-76) [plasma membrane] (R-HSA-8863120) TNF(77-233) [extracellular region] (R-HSA-976821) TNF(1-233) [plasma membrane] (R-HSA-66220)	0.837	9
UniProt:Q12933 TRAF2	5	K63polyUb-TRAF2 [nucleoplasm] (R-HSA-8862194) TRAF2 [nucleoplasm] (R-HSA-8862199) K63polyUb-TRAF2 [cytosol] (R-HSA-8862193) PolyUb-TRAF2 [cytosol] (R-HSA-6782848) TRAF2 [cytosol] (R-HSA-66370)	0.837	8
UniProt:Q13158 FADD	1	FADD [cytosol] (R-HSA-54639)	0.809	9
UniProt:Q13077 TRAF1	3	TRAF1(1-163) [cytosol] (R-HSA-5634199) TRAF1 [cytosol] (R-HSA-5634163) TRAF1(164-416) [cytosol] (R-HSA-5634204)	0.786	7
UniProt:Q13114 TRAF3	5	K48polyUb-TRAF3 [cytosol] (R-HSA-5668444) TRAF3 R118W [cytosol] (R-HSA-5602321) K48polyUb-TRAF3 [cytosol] (R-HSA-936556) TRAF3 [cytosol] (R-HSA-914241) K63polyUb-TRAF3 [cytosol] (R-HSA-936402)	0.675	4
UniProt:Q13489 BIRC3	3	K48pUb-BIRC3 [cytosol] (R-HSA-5675478) BIRC3 [cytosol] (R-HSA-50845) K63polyUb-BIRC3 [cytosol] (R-HSA-5668478)	0.602	3
UniProt:Q13490 BIRC2	5	K48pUb-BIRC2 [cytosol] (R-HSA-5675479) K63polyUb-BIRC2 [cytosol] (R-HSA-5668512) BIRC2(1-372) [cytosol] (R-HSA-202913) BIRC2(373-618) [cytosol] (R-HSA-202931) BIRC2 [cytosol] (R-HSA-50847)	0.602	3
UniProt:P48729 CSNK1A1	2	CSNK1A1 [cytosol] (R-HSA-195263) CSNK1A1 [cilium] (R-HSA-5632507)	0.602	5
UniProt:P08238 HSP90AB1	5	HSP90AB1 [extracellular region] (R-HSA-6806463) HSP90AB1 [ficolin-1-rich granule lumen] (R-HSA-6801491) HSP90AB1 [secretory granule lumen] (R-HSA-6801477) HSP90AB1 [nucleoplasm] (R-HSA-5082399) HSP90AB1 [cytosol] (R-HSA-419617)	0.589	2
UniProt:P04083 ANXA1	2	ANXA1 [extracellular region] (R-HSA-444539) ANXA1 [cytosol] (R-HSA-5263630)	0.556	5
IntAct:EBI-4399559 UBIQ			0.544	3
UniProt:Q8IVM0 CCD50			0.524	2
UniProt:Q13107 USP4	1	USP4 [cytosol] (R-HSA-5212663)	0.524	4
UniProt:O00635 TRIM38	1	TRIM38 [cytosol] (R-HSA-5624325)	0.508	2
UniProt:B7UI21 B7UI21			0.508	4
UniProt:U5TQE9 U5TQE9			0.499	3