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SARNP [nucleoplasm]
Stable Identifier
R-HSA-8849146
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
SAP domain-containing ribonucleoprotein, SARNP_HUMAN
Locations in the PathwayBrowser for interactor UniProt:Q01081%20U2AF1
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
mRNA 3'-end processing (Homo sapiens)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P82979 SARNP
Gene Names
SARNP, HCC1, HSPC316
Chain
initiator methionine:, chain:2-210
Reference Genes
BioGPS Gene:84324 SARNP
COSMIC (genes):SARNP SARNP
CTD Gene:84324 SARNP
dbSNP Gene:84324 SARNP
ENSEMBL:ENSG00000205323 SARNP
ENSEMBL_homo_sapiens_GENE:ENSG00000205323.9 SARNP
HGNC:24432 SARNP
KEGG Gene (Homo sapiens):84324 SARNP
Monarch:84324 SARNP
NCBI Gene:84324 SARNP
OMIM:610049 SARNP
UCSC:P82979 SARNP
Reference Transcript
RefSeq:NM_033082.3 SARNP
Other Identifiers
11734863_a_at
11734864_x_at
11744341_s_at
11748556_a_at
16765765
224914_PM_s_at
224914_s_at
229069_PM_at
229069_at
3457202
3457203
3457204
3457205
3457208
3457220
3457221
3457224
3457225
3457226
3457230
3457231
3457234
3457241
3457242
48831_at
63601_at
65915_at
7963923
84324
A_23_P43946
A_32_P165713
GO:0000122
GO:0000346
GO:0003677
GO:0003682
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0006351
GO:0006355
GO:0006406
GO:0006417
GO:0006913
GO:0016607
GO:0016973
GO:0036464
GO:0043226
GO:0051028
HMNXSV003012198
Hs.63908.0.S1_3p_at
Hs.63908.1.S1_3p_a_at
Hs.63908.1.S1_3p_x_at
ILMN_1680967
PH_hs_0024831
TC12002906.hg
TC12003278.hg
Participates
as an input of
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
as a component of
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
as an output of
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
Inferred To
CIP29 [nucleoplasm]
(Bos taurus)
SARNP [nucleoplasm]
(Caenorhabditis elegans)
SARNP [nucleoplasm]
(Canis familiaris)
SARNP [nucleoplasm]
(Dictyostelium discoideum)
SARNP [nucleoplasm]
(Gallus gallus)
SARNP [nucleoplasm]
(Sus scrofa)
Sarnp [nucleoplasm]
(Mus musculus)
Sarnp [nucleoplasm]
(Rattus norvegicus)
Dmel\CG8149 [nucleoplasm]
(Drosophila melanogaster)
Cross References
RefSeq
NP_149073.1
OpenTargets
ENSG00000205323
GeneCards
P82979
HPA
ENSG00000205323-SARNP
Ensembl
ENSG00000205323
,
ENSP00000449409
,
ENSP00000337632
,
ENST00000336133
,
ENST00000546604
PRO
P82979
Pharos - Targets
P82979
PDB
2DO1
Interactors (6)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O00148 DDX39A
1
DDX39A [nucleoplasm]
(R-HSA-8852237)
0.666
4
UniProt:Q13838 DDX39B
2
DDX39B [cytosol]
(R-HSA-9715154)
DDX39B [nucleoplasm]
(R-HSA-8849139)
0.666
4
UniProt:O76024 WFS1
3
WFS1 [endoplasmic reticulum lumen]
(R-HSA-8956747)
p-WFS1 [endoplasmic reticulum lumen]
(R-HSA-8956998)
WFS1 [endoplasmic reticulum membrane]
(R-HSA-535474)
0.556
3
UniProt:Q96FV9 THOC1
1
THOC1 [nucleoplasm]
(R-HSA-8849130)
0.527
2
UniProt:P26368 U2AF2
2
5OHK15,276-U2AF2 [nucleoplasm]
(R-HSA-9630011)
U2AF2 [nucleoplasm]
(R-HSA-71987)
0.471
3
UniProt:Q01081 U2AF1
1
U2AF1 [nucleoplasm]
(R-HSA-71985)
0.471
3
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