Reactome | mRNA Editing: A to I Conversion

mRNA Editing: A to I Conversion

Stable Identifier

R-HSA-75064

Type

Pathway

Species

Homo sapiens

Compartment

nucleoplasm

ReviewStatus

5/5

Locations in the PathwayBrowser

Expand all

General

SBML | | PDF

SVG | | PPTX | SBGN

Click the image above or here to open this pathway in the Pathway Browser

In humans the deamination of adenosines to inosines is the most common editing event. It is particularly prevalent in the brain, where it leads to amino acid changes that affect the conductance of several ion channels. Inosines are recognized by the translation machinery as if they were guanosines.
ADARs (Adenosine Deaminases Acting on RNA) modify pre-mRNA, acting as single peptides and recognize structural determinants in the RNA. To date 3 members of this deaminase family are known: ADAR 1, ADAR 2, and ADAR 3 that share a common modular domain structure. ADAR 1 and 2 contain a catalytic deaminase domain, a double-stranded RNA binding domain and exhibit RNA editing activity. ADAR1 activity is found in various mammalian tissues with the highest concentration in brain.
An increasing number of mammalian genes have been found to undergo deamination by ADARs. Deamination by editing in pre-mRNAs encoding subunits of ionotropic glutamate receptors (GluRs) is another well studied example. An editing event at the Q/R site of the GluR2 (GluRB) subunit of AMPA receptors converts a Gln codon CAG to an Arg codon CIG rendering the heteromeric receptor impermeable to Ca 2+ ions. Another example is the editing of 5-HT2C subtype serotonin receptor mRNA resulting in receptor isoforms with reduced G-protein coupling efficiency (reviewed by Gerber and Keller, 2001).
In mice, the editosomes with ADAR proteins require some cis-acting elements like an intronic 'editing-site complementary sequence (ECS)'. Although evolutionarily conserved, the actual role of ECS is not yet elucidated in humans. The editing complex can be generally represented as:

Literature References

PubMed ID	Title	Journal	Year
11406411	RNA editing by base deamination: more enzymes, more targets, new mysteries. Keller, W, Gerber, AP	Trends Biochem Sci	2001
1747369	The mechanism of adenosine to inosine conversion by the double-stranded RNA unwinding/modifying activity: a high-performance liquid chromatography-mass spectrometry analysis. Pomerantz, SC, McCloskey, JA, Crain, PF, Polson, AG, Bass, BL	Biochemistry	1992
12045112	RNA editing by adenosine deaminases that act on RNA. Bass, BL	Annu Rev Biochem	2002
12446660	C-to-U RNA editing: mechanisms leading to genetic diversity. Davidson, NO, Blanc, V	J Biol Chem	2003
8943218	RED2, a brain-specific member of the RNA-specific adenosine deaminase family. Higuchi, M, Herb, A, Sprengel, R, Maas, S, Seeburg, PH, Melcher, T	J Biol Chem	1997