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CDC40 [nucleoplasm]
Stable Identifier
R-HSA-72062
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
hPrp17, Pre-mRNA splicing factor PRP17 (hPRP17) (EH-binding protein 3) (Ehb3), Pre-mRNA splicing factor PRP17, hPRP17, Cell division cycle 40 homolog, EH-binding protein 3, Ehb3
Locations in the PathwayBrowser for interactor UniProt:Q9CSN1
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
CDC40 [nucleoplasm] (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Disassembly of the Intron Lariat Spliceosome (new) (Homo sapiens)
CDC40 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal A complex (Homo sapiens)
CDC40 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O60508 CDC40
Gene Names
CDC40, EHB3, PRP17, PRPF17
Chain
chain:1-579
Reference Genes
BioGPS Gene:51362 CDC40
COSMIC (genes):CDC40 CDC40
CTD Gene:51362 CDC40
dbSNP Gene:51362 CDC40
ENSEMBL:ENSG00000168438 CDC40
ENSEMBL_homo_sapiens_GENE:ENSG00000168438.15 CDC40
HGNC:17350 CDC40
KEGG Gene (Homo sapiens):51362 CDC40
Monarch:51362 CDC40
NCBI Gene:51362 CDC40
OMIM:605585 CDC40
UCSC:O60508 CDC40
Reference Transcript
RefSeq:NM_015891.2 CDC40
Other Identifiers
11720428_a_at
11720429_at
11753196_a_at
17011635
203376_PM_at
203376_at
203377_PM_s_at
203377_s_at
2921091
2921092
2921093
2921094
2921095
2921097
2921100
2921101
2921103
2921104
2921106
2921108
2921110
2921115
2921118
2921119
2921120
2921125
2921126
2921127
2921128
2921129
2921130
2921131
2921132
37481_at
3976447
4007276
51362
61649_at
77496_at
8121461
91158_at
A_14_P121490
A_23_P33455
A_23_P351314
A_23_P351320
A_24_P414786
GE80118
GO:0000398
GO:0003723
GO:0003729
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0006397
GO:0008380
GO:0016071
GO:0016607
GO:0043226
GO:0048856
GO:0071007
GO:0071013
GO:1990403
HMNXSV003045444
Hs.116674.0.S2_3p_at
ILMN_1737651
PH_hs_0006393
TC06000882.hg
g7706656_3p_a_at
p33574
Participates
as an output of
Disassembly of the Intron Lariat Spliceosome (new) (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
as a component of
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
Spliceosomal B complex [nucleoplasm] (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
Spliceosomal A complex [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C Complex [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
Spliceosomal C* complex [nucleoplasm] (Homo sapiens)
Intron Lariat Spliceosome (ILS) [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
as an input of
Formation of the Spliceosomal A complex (Homo sapiens)
Inferred To
prp17 [nucleoplasm]
(Schizosaccharomyces pombe)
CDC40 [nucleoplasm]
(Bos taurus)
CDC40 [nucleoplasm]
(Canis familiaris)
CDC40 [nucleoplasm]
(Drosophila melanogaster)
CDC40 [nucleoplasm]
(Gallus gallus)
CDC40 [nucleoplasm]
(Plasmodium falciparum)
CDC40 [nucleoplasm]
(Saccharomyces cerevisiae)
CDC40 [nucleoplasm]
(Sus scrofa)
zgc:86860 [nucleoplasm]
(Danio rerio)
prp-17 [nucleoplasm]
(Caenorhabditis elegans)
cdc40 [nucleoplasm]
(Dictyostelium discoideum)
cdc40 [nucleoplasm]
(Xenopus tropicalis)
Cdc40 [nucleoplasm]
(Mus musculus)
Cdc40 [nucleoplasm]
(Rattus norvegicus)
Cross References
RefSeq
NP_056975.1
OpenTargets
ENSG00000168438
GeneCards
O60508
HPA
ENSG00000168438-CDC40
Ensembl
ENSP00000304370
,
ENSG00000168438
,
ENSP00000357928
,
ENST00000368932
,
ENST00000307731
PRO
O60508
Pharos - Targets
O60508
PDB
6FF7
,
5MQF
,
7W59
,
7AAV
,
6QDV
,
7ABI
,
8CH6
,
5Z56
,
6ICZ
,
8C6J
,
6ID0
,
7W5A
,
7A5P
,
5Z57
,
6FF4
,
6ZYM
,
5YZG
,
6ID1
,
7W5B
,
5XJC
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9UMS4 PRPF19
1
PRPF19 [nucleoplasm]
(R-HSA-5420907)
0.632
3
UniProt:Q9CSN1 Snw1
1
Snw1 [nucleoplasm]
(R-MMU-2065315)
0.564
2
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