Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
DHX38 [nucleoplasm]
Stable Identifier
R-HSA-72060
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
hPrp16, Pre-mRNA splicing factor ATP-dependent RNA helicase PRP16 (ATP- dependent RNA helicase DDX38) (DEAH-box protein 38), Pre-mRNA splicing factor ATP-dependent RNA helicase PRP16, ATP- dependent RNA helicase DHX38, DEAH-box protein 38
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA Polymerase II Transcription Termination (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
mRNA 3'-end processing (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
mRNA polyadenylation (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal B* complex (new) (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal C* complex (update) (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
DHX38 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q92620 DHX38
Gene Names
DHX38, DDX38, KIAA0224, PRP16
Chain
initiator methionine:1, chain:2-1227
Reference Genes
BioGPS Gene:9785 DHX38
COSMIC (genes):DHX38 DHX38
CTD Gene:9785 DHX38
dbSNP Gene:9785 DHX38
ENSEMBL:ENSG00000140829.12 DHX38
HGNC:17211 DHX38
KEGG Gene (Homo sapiens):9785 DHX38
Monarch:9785 DHX38
NCBI Gene:9785 DHX38
OMIM:605584 DHX38
UCSC:Q92620 DHX38
Reference Transcript
RefSeq:XM_011523485.1 DHX38
RefSeq:NM_014003.3 DHX38
RefSeq:XM_011523484.1 DHX38
Other Identifiers
0002370048
11744451_a_at
11744452_x_at
11745099_x_at
11747396_a_at
16820953
209178_PM_at
209178_at
3667903
3667904
3667905
3667907
3667908
3667909
3667910
3667911
3667914
3667916
3667918
3667920
3667921
3667923
3667925
3667927
3667928
3667929
3667930
3667931
3667933
3667934
3667936
3667938
3667939
3667942
3667945
3667946
3667947
3667948
3667949
37390_at
7997197
9785
A_14_P133344
A_23_P38011
D86977_at
GE81844
GO:0000166
GO:0000398
GO:0003676
GO:0003723
GO:0003724
GO:0004386
GO:0005515
GO:0005524
GO:0005622
GO:0005634
GO:0005654
GO:0005681
GO:0006397
GO:0008380
GO:0016020
GO:0016071
GO:0016787
GO:0016887
GO:0032991
GO:0043226
GO:0071013
GO:0140098
GO:0140657
HMNXSV003028469
HMNXSV003029604
ILMN_1735679
PH_hs_0026907
TC16000601.hg
TC16001627.hg
g3123905_3p_at
Participates
as a component of
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C Complex [nucleoplasm] (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
as an input of
Formation of the Spliceosomal B* complex (new) (Homo sapiens)
as an output of
Formation of the Spliceosomal C* complex (update) (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
Inferred To
Dhx38 [nucleoplasm]
(Mus musculus)
Dhx38 [nucleoplasm]
(Rattus norvegicus)
Prp16 [nucleoplasm]
(Drosophila melanogaster)
helD [nucleoplasm]
(Dictyostelium discoideum)
dhx38 [nucleoplasm]
(Xenopus tropicalis)
DHX38 [nucleoplasm]
(Bos taurus)
DHX38 [nucleoplasm]
(Caenorhabditis elegans)
DHX38 [nucleoplasm]
(Canis familiaris)
DHX38 [nucleoplasm]
(Danio rerio)
DHX38 [nucleoplasm]
(Gallus gallus)
DHX38 [nucleoplasm]
(Plasmodium falciparum)
DHX38 [nucleoplasm]
(Schizosaccharomyces pombe)
DHX38 [nucleoplasm]
(Sus scrofa)
Cross References
RefSeq
XP_011521786.1
,
NP_054722.2
,
XP_011521787.1
OpenTargets
ENSG00000140829
HPA
ENSG00000140829-DHX38
GeneCards
Q92620
Ensembl
ENSG00000140829
,
ENST00000268482
,
ENSP00000268482
PRO
Q92620
Pharos - Targets
Q92620
Orphanet
24463
PDB
5YZG
,
7A5P
,
6ZYM
HMDB Protein
HMDBP11901
Interactors (7)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9NY27 PPP4R2
1
PPP4R2 [nucleoplasm]
(R-HSA-5687747)
0.569
3
UniProt:P60510 PPP4C
1
PPP4C [nucleoplasm]
(R-HSA-5687750)
0.527
2
UniProt:P98175 RBM10
1
RBM10 [nucleoplasm]
(R-HSA-9770262)
0.508
2
UniProt:Q9NYB0 TERF2IP
1
TERF2IP [nucleoplasm]
(R-HSA-174873)
0.508
2
UniProt:Q92917 GPKOW
1
GPKOW [nucleoplasm]
(R-HSA-8850839)
0.508
2
UniProt:O60231 DHX16
1
DHX16 [nucleoplasm]
(R-HSA-8850837)
0.508
2
UniProt:Q96RS6 NUDC1
0.499
2
© 2023
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text