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SF3A1 [nucleoplasm]
Stable Identifier
R-HSA-71962
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
SAP 114 (Splicing factor 3A subunit 1), Splicing factor 3 subunit 1, Spliceosome associated protein 114, SAP 114, SF3a120
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Cleavage at the 3'-Splice Site and Exon Ligation (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Formation of Exon Junction Complex (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Formation of an intermediate Spliceosomal C (Bact) complex (Homo sapiens)
Spliceosomal B Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal A Complex (Homo sapiens)
Spliceosomal A Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B Complex (Homo sapiens)
Spliceosomal A Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Spliceosomal B Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Formation of the active Spliceosomal C (B*) complex (Homo sapiens)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Lariat Formation and 5'-Splice Site Cleavage (Homo sapiens)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
U2 snRNP [nucleoplasm] (Homo sapiens)
SF3A [nucleoplasm] (Homo sapiens)
SF3A1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q15459 SF3A1
Gene Names
SF3A1, SAP114
Chain
initiator methionine:1, chain:2-793
Reference Genes
BioGPS Gene:10291 SF3A1
COSMIC (genes):SF3A1 SF3A1
CTD Gene:10291 SF3A1
dbSNP Gene:10291 SF3A1
ENSEMBL:ENSG00000099995 SF3A1
HGNC:10765 SF3A1
KEGG Gene (Homo sapiens):10291 SF3A1
Monarch:10291 SF3A1
NCBI Gene:10291 SF3A1
OMIM:605595 SF3A1
UCSC:Q15459 SF3A1
Reference Transcript
RefSeq:NM_005877.5 SF3A1
Other Identifiers
0004210091
10291
11721072_a_at
11721073_a_at
11750638_a_at
16933818
201356_at
201357_s_at
216457_s_at
227516_at
34733_at
3957261
3957262
3957263
3957264
3957266
3957267
3957268
3957269
3957270
3957271
3957272
3957273
3957274
3957275
3957276
3957277
3957278
3957281
3957283
3957284
3957287
3957289
3957290
3957291
3957292
78615_at
8075343
91167_s_at
91508_at
A_23_P104676
A_23_P211436
A_24_P250614
A_24_P374154
A_33_P3210059
GE60099
GO:0000389
GO:0000398
GO:0003674
GO:0003723
GO:0005515
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0005681
GO:0005684
GO:0005686
GO:0006396
GO:0006397
GO:0008150
GO:0008380
GO:0016607
GO:0022607
GO:0022618
GO:0032991
GO:0034641
GO:0043226
GO:0065003
GO:0071004
GO:0071005
GO:0071013
GO:1903241
Hs.288883.0.A2_3p_a_at
Hs.288883.0.A2_3p_at
Hs.288883.1.S1_3p_at
Hs.288883.2.A1_3p_a_at
ILMN_1655809
ILMN_1697286
PH_hs_0034193
TC22000650.hg
X85237_at
g5032086_3p_a_at
Participant Of
hasComponent
SF3A [nucleoplasm]
Inferred To
SF3A1 [nucleoplasm] (Canis familiaris)
SF3A1 [nucleoplasm] (Gallus gallus)
SF3A1 [nucleoplasm] (Sus scrofa)
sf3a1 [nucleoplasm] (Danio rerio)
sf3a1 [nucleoplasm] (Dictyostelium discoideum)
otub1 [nucleoplasm] (Xenopus tropicalis)
Sf3a1 [nucleoplasm] (Drosophila melanogaster)
Sf3a1 [nucleoplasm] (Mus musculus)
Sf3a1 [nucleoplasm] (Rattus norvegicus)
prp-21 [nucleoplasm] (Caenorhabditis elegans)
Cross References
RefSeq
NP_005868.1
OpenTargets
ENSG00000099995
HPA
ENSG00000099995-SF3A1
GeneCards
Q15459
Ensembl
ENSP00000215793
,
ENSG00000099995
,
ENST00000215793
PRO
Q15459
PDB
6AHD
,
6Y53
,
2DT7
,
1ZKH
,
2DT6
,
6Y5Q
,
6QX9
,
6FF7
,
5Z56
,
6AH0
,
5Z57
,
5Z58
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q15637 SF1
1
SF1 [nucleoplasm]
(R-HSA-8865928)
0.709
8
UniProt:O75554 WBP4
1
WBP4 [nucleoplasm]
(R-HSA-8867895)
0.573
2
UniProt:P08047 SP1
1
SP1 [nucleoplasm]
(R-HSA-1592223)
0.508
2
UniProt:O75400 PRPF40A
1
PRPF40A [nucleoplasm]
(R-HSA-8867890)
0.508
2
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