Reactome | SNRPB2 [nucleoplasm]

SNRPB2 [nucleoplasm]

Stable Identifier

R-HSA-71960

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

nucleoplasm

Synonyms

U2 B' protein, U2 small nuclear ribonucleoprotein B

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:P08579 SNRPB2

Gene Names

SNRPB2

Chain

chain:1-225

Reference Genes

BioGPS Gene:6629 SNRPB2

COSMIC (genes):SNRPB2 SNRPB2

CTD Gene:6629 SNRPB2

dbSNP Gene:6629 SNRPB2

ENSEMBL:ENSG00000125870 SNRPB2

ENSEMBL_homo_sapiens_GENE:ENSG00000125870.11 SNRPB2

HGNC:11155 SNRPB2

KEGG Gene (Homo sapiens):6629 SNRPB2

Monarch:6629 SNRPB2

NCBI Gene:6629 SNRPB2

OMIM:603520 SNRPB2

UCSC:P08579 SNRPB2

Reference Transcript

Other Identifiers

11731480_a_at

11744212_x_at

11753546_a_at

11756021_x_at

16911605

202505_PM_at

202505_at

2978761

2978763

2978764

38399_at

3877779

3877780

3877781

3877782

3877788

3877789

3877790

3877793

3877796

3877799

3877801

3877802

3877803

3877804

3877805

3877806

3877808

44293_at

6629

74555_at

8061075

A_23_P40307

A_24_P194260

GE61284

GO:0000398

GO:0001650

GO:0003676

GO:0003723

GO:0005515

GO:0005634

GO:0005654

GO:0005681

GO:0005684

GO:0005685

GO:0005686

GO:0005730

GO:0006397

GO:0008380

GO:0016071

GO:0016607

GO:0030532

GO:0030619

GO:0036464

GO:0043226

GO:0065003

GO:0070990

GO:0071005

GO:0071007

GO:0071013

GO:1903241

GO:1990904

HMNXSV003028131

ILMN_1690706

ILMN_1771620

M15841_at

PH_hs_0029603

TC20000104.hg

TC20001115.hg

g4507122_3p_at

Participates

as a component of

Inferred To

snf [nucleoplasm] (Drosophila melanogaster)

SNRPB2 [nucleoplasm] (Gallus gallus)

SNRPB2 [nucleoplasm] (Plasmodium falciparum)

SNRPB2 [nucleoplasm] (Sus scrofa)

Snrpb2 [nucleoplasm] (Mus musculus)

Homologues of SNRPB2 [nucleoplasm] (Plasmodium falciparum)

snrpb2 [nucleoplasm] (Danio rerio)

snrpb2 [nucleoplasm] (Dictyostelium discoideum)

snrpb2 [nucleoplasm] (Xenopus tropicalis)

LOC100686524 [nucleoplasm] (Canis familiaris)

usp102 [nucleoplasm] (Schizosaccharomyces pombe)

Ghost homologue of SNRPB2 [nucleoplasm] (Bos taurus)

Ghost homologue of SNRPB2 [nucleoplasm] (Rattus norvegicus)

rnp-2 [nucleoplasm] (Caenorhabditis elegans)

Cross References

RefSeq

NP_937863.1, NP_003083.1

OpenTargets

ENSG00000125870

HPA

ENSG00000125870-SNRPB2

GeneCards

P08579

Ensembl

ENSP00000367178, ENST00000377943, ENSP00000246071, ENSG00000125870, ENST00000246071

PRO

P08579

Pharos - Targets

P08579

PDB

7VPX, 5YZG, 6ID0, 5O9Z, 5XJC, 6QDV, 5MQF, 5Z57, 5Z58, 6ICZ, 8QO9, 6Y5Q, 7W5A, 8C6J, 6AHD, 8HK1, 6FF7, 5Z56, 7W5B, 7EVO, 7ABI, 6AH0, 7W59, 6Y53, 1A9N, 8CH6, 7A5P, 7ABG, 6QX9, 6ID1

Interactors (17)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P09661 SNRPA1	1	SNRPA1 [nucleoplasm] (R-HSA-71958)	0.833	9
UniProt:P14373 TRIM27	2	TRIM27 [nucleoplasm] (R-HSA-2997690) TRIM27 [cytosol] (R-HSA-8851002)	0.718	6
UniProt:P62306 SNRPF	2	SNRPF [nucleoplasm] (R-HSA-71907) SNRPF [cytosol] (R-HSA-191852)	0.643	5
UniProt:P62304 SNRPE	2	SNRPE [nucleoplasm] (R-HSA-71905) SNRPE [cytosol] (R-HSA-191782)	0.643	5
UniProt:P62318 SNRPD3	3	SNRPD3 [nucleoplasm] (R-HSA-71903) 2xMe-SNRPD3 [nucleoplasm] (R-HSA-192219) 2xMe-SNRPD3 [cytosol] (R-HSA-191781)	0.564	3
UniProt:P13196 ALAS1	2	PXLP-ALAS1 [mitochondrial matrix] (R-HSA-1022086) ALAS1 [mitochondrial matrix] (R-HSA-189438)	0.556	3
UniProt:Q08379 GOLGA2	3	p-S37-GOLGA2 [Golgi membrane] (R-HSA-2172179) GOLGA2 [endoplasmic reticulum-Golgi intermediate compartment membrane] (R-HSA-2167933) GOLGA2 [Golgi membrane] (R-HSA-6808764)	0.556	3
UniProt:Q14566 MCM6	1	MCM6 [nucleoplasm] (R-HSA-68553)	0.556	3
UniProt:Q9NRD5 PICK1	2	PICK1 [endocytic vesicle membrane] (R-HSA-417017) PICK1 [plasma membrane] (R-HSA-416989)	0.556	3
UniProt:Q8IWZ8 SUGP1	1	SUGP1 [nucleoplasm] (R-HSA-72043)	0.547	2
UniProt:Q13573 SNW1	1	SNW1 [nucleoplasm] (R-HSA-351663)	0.527	2
UniProt:O43719 HTATSF1	1	HTATSF1 [nucleoplasm] (R-HSA-9770246)	0.527	4
UniProt:P62316 SNRPD2	2	SNRPD2 [nucleoplasm] (R-HSA-71901) SNRPD2 [cytosol] (R-HSA-191810)	0.527	5
UniProt:O75533 SF3B1	1	SF3B1 [nucleoplasm] (R-HSA-71968)	0.527	5
UniProt:P14678 SNRPB	4	SNRPB [nucleoplasm] (R-HSA-71896) Me2-R108,R112-SNRPB [nucleoplasm] (R-HSA-192213) SNRPB [cytosol] (R-HSA-191798) 2xMe-SNRPB [cytosol] (R-HSA-192218)	0.527	5
UniProt:P62314 SNRPD1	3	2xMe-SNRPD1 [nucleoplasm] (R-HSA-192215) SNRPD1 [cytosol] (R-HSA-191890) 2xMe-SNRPD1 [cytosol] (R-HSA-192217)	0.527	2
UniProt:O75937 DNAJC8	1	DNAJC8 [nucleoplasm] (R-HSA-53703)	0.508	2

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