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SNRNP200 [nucleoplasm]
Stable Identifier
R-HSA-71885
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
U5-200kDa helicase, U520_HUMAN, U5 small nuclear ribonucleoprotein 200 kDa helicase , U5 snRNP-specific 200 kDa protein, U5-200KD
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Cleavage at the 3'-Splice Site and Exon Ligation (Homo sapiens)
intron-containing complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Formation of Exon Junction Complex (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Formation of an intermediate Spliceosomal C complex (Homo sapiens)
Spliceosomal B Complex [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal B Complex (Homo sapiens)
Spliceosomal B Complex [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Formation of the active Spliceosomal C complex (Homo sapiens)
Spliceosomal Active C Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Lariat Formation and 5'-Splice Site Cleavage (Homo sapiens)
Spliceosomal Active C Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
mRNA Splicing - Minor Pathway (Homo sapiens)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Homo sapiens)
ATAC C Complex with lariat containing 5'-end cleaved mRNA [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Homo sapiens)
ATAC C Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
ATAC C Complex with lariat containing 5'-end cleaved mRNA [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Formation of AT-AC B Complex (Homo sapiens)
ATAC B Complex [nucleoplasm] (Homo sapiens)
U4 ATAC:U5:U6 ATAC Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
U4 ATAC:U5:U6 ATAC Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
Formation of AT-AC C complex (Homo sapiens)
ATAC B Complex [nucleoplasm] (Homo sapiens)
U4 ATAC:U5:U6 ATAC Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
ATAC C Complex [nucleoplasm] (Homo sapiens)
U5 snRNP [nucleoplasm] (Homo sapiens)
SNRNP200 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:O75643 SNRNP200
Gene Names
SNRNP200, ASCC3L1, HELIC2, KIAA0788
Chain
chain:1-2136
Reference Genes
BioGPS Gene:23020 SNRNP200
COSMIC (genes):SNRNP200 SNRNP200
CTD Gene:23020 SNRNP200
dbSNP Gene:23020 SNRNP200
ENSEMBL:ENSG00000144028 SNRNP200
HGNC:30859 SNRNP200
KEGG Gene (Homo sapiens):23020 SNRNP200
Monarch:23020 SNRNP200
NCBI Gene:23020 SNRNP200
OMIM:601664 SNRNP200
UCSC:O75643 SNRNP200
Reference Transcript
RefSeq:XM_017003603.1 SNRNP200
RefSeq:NM_014014.4 SNRNP200
Other Identifiers
0001050142
11744200_a_at
11744201_x_at
11749487_x_at
11752226_a_at
11752227_x_at
16900474
18670346
18670347
18670348
18670349
18670351
18670352
18670353
18670354
18670355
18670358
18670360
18670361
18670363
18670366
18670368
18670369
18670370
18670371
18670372
18670373
18670374
18670375
18670376
18670377
18670378
18670379
18670380
18670381
18670382
18670383
18670384
18670385
18670386
18670387
18670388
18670389
18670390
18670391
18670392
18670393
18670394
18670395
18670396
18670397
200058_PM_s_at
200058_s_at
23020
2564999
2565263
2565264
2565265
2565266
2565268
2565269
2565270
2565271
2565274
2565275
2565277
2565279
2565280
2565281
2565284
2565286
2565287
2565288
2565289
2565291
2565293
2565295
2565296
2565297
2565298
2565299
2565300
2565301
2565302
2565304
2565306
2565307
2565308
2565309
2565310
2565312
2565315
2565316
2565317
2565318
2565319
2565320
2565321
2565323
2565325
2565328
2565329
2565330
2565331
2565332
2565333
3731347
3731348
3731350
3731352
3731353
41224_at
47994_at
68805_f_at
7892678
7892747
7893070
7893485
7893676
7894329
7894350
7894438
7894470
7895476
7895857
7896186
7896230
7896484
7896646
8053909
A_23_P131626
GE80285
GO:0000166
GO:0000354
GO:0000388
GO:0000398
GO:0001649
GO:0003674
GO:0003676
GO:0003723
GO:0003724
GO:0004386
GO:0005515
GO:0005524
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0005681
GO:0005682
GO:0006397
GO:0008150
GO:0008380
GO:0016020
GO:0016787
GO:0016887
GO:0022607
GO:0022618
GO:0030154
GO:0032991
GO:0034641
GO:0042802
GO:0043167
GO:0043226
GO:0046540
GO:0065003
GO:0071005
GO:0071006
GO:0071013
GO:0140657
HMNXSV003001029
ILMN_1705928
ILMN_3235185
PH_hs_0013065
TC02002106.hg
g12655128_3p_a_at
Participates
as a component of
U5 snRNP [nucleoplasm] (Homo sapiens)
Inferred To
SNRNP200 [nucleoplasm]
(Bos taurus)
l(3)72Ab [nucleoplasm]
(Drosophila melanogaster)
snrnp200 [nucleoplasm]
(Danio rerio)
Snrnp200 [nucleoplasm]
(Mus musculus)
Snrnp200 [nucleoplasm]
(Rattus norvegicus)
snrp-200 [nucleoplasm]
(Caenorhabditis elegans)
Ghost homologue of SNRNP200 [nucleoplasm]
(Canis familiaris)
Ghost homologue of SNRNP200 [nucleoplasm]
(Gallus gallus)
Ghost homologue of SNRNP200 [nucleoplasm]
(Sus scrofa)
Ghost homologue of SNRNP200 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
NP_054733.2
,
XP_016859092.1
OpenTargets
ENSG00000144028
GeneCards
O75643
HPA
ENSG00000144028-SNRNP200
Ensembl
ENST00000323853
,
ENSG00000144028
,
ENSP00000317123
PRO
O75643
Pharos - Targets
O75643
Orphanet
18963
HMDB Protein
HMDBP11987
PDB
6FF7
,
5URJ
,
4KIT
,
5YZG
,
7BDL
,
5Z57
,
5O9Z
,
5URK
,
6ICZ
,
5URM
,
5Z58
,
5XJC
,
3JCR
,
7A5P
,
6S8O
,
6QX9
,
6S8Q
,
4F93
,
7ABG
,
6AH0
,
4F92
,
7ABI
,
6QW6
,
7BDI
,
6S9I
,
2Q0Z
,
7BDJ
,
6QDV
,
6AHD
,
5Z56
,
4F91
,
7DVQ
,
7BDK
Interactors (8)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O75554 WBP4
1
WBP4 [nucleoplasm]
(R-HSA-8867895)
0.688
11
UniProt:O95400 CD2BP2
1
CD2BP2 [nucleoplasm]
(R-HSA-72054)
0.657
3
UniProt:P31946 YWHAB
1
YWHAB [cytosol]
(R-HSA-48888)
0.589
2
UniProt:Q9CSN1 Snw1
1
Snw1 [nucleoplasm]
(R-MMU-2065315)
0.564
2
UniProt:P01106 MYC
2
PolyUb-MYC [nucleoplasm]
(R-HSA-6783169)
MYC [nucleoplasm]
(R-HSA-188379)
0.564
2
UniProt:Q13573 SNW1
1
SNW1 [nucleoplasm]
(R-HSA-351663)
0.527
2
UniProt:O43290 SART1
1
SART1 [nucleoplasm]
(R-HSA-4615999)
0.508
5
UniProt:P11387 TOP1
2
TOP1 [nucleoplasm]
(R-HSA-4641363)
monoSUMO1-K117-TOP1 [nucleoplasm]
(R-HSA-4641364)
0.462
2
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