Reactome | VCP [azurophil granule lumen]

VCP [azurophil granule lumen]

Stable Identifier

R-HSA-6800438

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

azurophil granule lumen

Synonyms

p97 ATPase, Transitional endoplasmic reticulum ATPase, TERA_HUMAN

Locations in the PathwayBrowser

Expand all

External Reference Information

External Reference

UniProt:P55072 VCP

Gene Names

VCP

Chain

initiator methionine:1, chain:2-806

Reference Genes

BioGPS Gene:7415 VCP

COSMIC (genes):VCP VCP

CTD Gene:7415 VCP

dbSNP Gene:7415 VCP

ENSEMBL:ENSG00000165280 VCP

HGNC:12666 VCP

KEGG Gene (Homo sapiens):7415 VCP

Monarch:7415 VCP

NCBI Gene:7415 VCP

OMIM:601023 VCP

Reference Transcript

RefSeq:NM_007126.3 VCP

Other Identifiers

0007100136

11733010_a_at

11745875_x_at

11746412_x_at

11758451_s_at

17093570

208648_at

208649_s_at

3204407

3204408

3204409

3204410

3204412

3204414

3204415

3204417

3204419

3204420

3204421

3204422

3204423

3204425

3204426

3204429

3204430

3204432

3204433

3204435

3204437

3204440

3204441

3204454

33818_at

44058_at

56348_at

7415

8160914

A_23_P83045

A_24_P295412

GE54792

GE79640

GO:0000166

GO:0000278

GO:0000502

GO:0002376

GO:0003674

GO:0003723

GO:0005102

GO:0005515

GO:0005524

GO:0005575

GO:0005576

GO:0005615

GO:0005622

GO:0005634

GO:0005654

GO:0005694

GO:0005737

GO:0005764

GO:0005773

GO:0005783

GO:0005789

GO:0005811

GO:0005829

GO:0006091

GO:0006259

GO:0006281

GO:0006302

GO:0006457

GO:0006464

GO:0006511

GO:0006734

GO:0006810

GO:0006888

GO:0006914

GO:0006919

GO:0006950

GO:0006974

GO:0007010

GO:0007034

GO:0007049

GO:0007165

GO:0007267

GO:0008150

GO:0008219

GO:0008289

GO:0009056

GO:0009058

GO:0010494

GO:0010498

GO:0010918

GO:0015031

GO:0016192

GO:0016236

GO:0016567

GO:0016579

GO:0016787

GO:0016887

GO:0019079

GO:0019899

GO:0019903

GO:0019904

GO:0019985

GO:0022607

GO:0030234

GO:0030433

GO:0030968

GO:0030970

GO:0031334

GO:0031410

GO:0031593

GO:0031625

GO:0032436

GO:0032510

GO:0032991

GO:0034098

GO:0034330

GO:0034605

GO:0034641

GO:0034655

GO:0034774

GO:0035578

GO:0035617

GO:0035800

GO:0035861

GO:0036297

GO:0036435

GO:0036503

GO:0036513

GO:0042288

GO:0042802

GO:0042981

GO:0043161

GO:0043167

GO:0043226

GO:0043231

GO:0043312

GO:0043531

GO:0044281

GO:0044389

GO:0044403

GO:0044877

GO:0045184

GO:0045202

GO:0045732

GO:0045879

GO:0046034

GO:0048471

GO:0050807

GO:0051228

GO:0055085

GO:0061857

GO:0065003

GO:0070062

GO:0070842

GO:0070987

GO:0071712

GO:0072389

GO:0090263

GO:0097352

GO:0098978

GO:0106300

GO:1903006

GO:1903007

GO:1903715

GO:1903843

GO:1903862

GO:1904288

GO:1904813

GO:1904949

GO:1905634

GO:1990381

GO:1990730

GO:2000158

GO:2001171

HMNXSV003053327

Hs.106357.0.S2_3p_at

ILMN_1665376

ILMN_1777220

PH_hs_0024763

TC09001048.hg

TC09002468.hg

g5410289_3p_a_at

Participates

as a member of

Azurophil granule lumen proteins [azurophil granule lumen] (Homo sapiens)

Other forms of this molecule

Me3K315-VCP [cytosol]

VCP [endoplasmic reticulum membrane]

VCP [nucleoplasm]

VCP [ficolin-1-rich granule lumen]

VCP [extracellular region]

VCP [secretory granule lumen]

VCP [cytosol]

Inferred To

CDC48 [azurophil granule lumen] (Saccharomyces cerevisiae)

VCP [azurophil granule lumen] (Canis familiaris)

VCP [azurophil granule lumen] (Plasmodium falciparum)

Vcp [azurophil granule lumen] (Mus musculus)

Vcp [azurophil granule lumen] (Rattus norvegicus)

cdc-48.2 [azurophil granule lumen] (Caenorhabditis elegans)

TER94 [azurophil granule lumen] (Drosophila melanogaster)

cdc48 [azurophil granule lumen] (Schizosaccharomyces pombe)

cdcD [azurophil granule lumen] (Dictyostelium discoideum)

vcp [azurophil granule lumen] (Danio rerio)

vcp [azurophil granule lumen] (Gallus gallus)

vcp [azurophil granule lumen] (Xenopus tropicalis)

Cross References

RefSeq

NP_009057.1

OpenTargets

ENSG00000165280

ZINC - Substances

TERA_HUMAN

ZINC target

P55072

PRO

P55072

PDB

6G2X, 3QC8, 3QQ8, 3EBB, 4KLN, 3QQ7, 5B6C, 3TIW, 4KDL, 6G2Y, 6MCK, 6G2V, 3HU2, 5C1B, 3HU1, 5FTN, 6G2W, 4KO8, 5GLF, 5C19, 4P0A, 6HD0, 5IFW, 4KOD, 5DYI, 3HU3, 5C1A, 5FTL, 5C18, 5FTM, 4KDI, 5KIW, 6G2Z, 5KIY, 5X4L, 6G30, 5DYG, 5EPP, 3QWZ, 5FTJ, 5IFS, 5FTK

Target Pathogen

5b354852be737e166372e8ef, 5b354852be737e166372e859

GeneCards

P55072

HPA

ENSG00000165280-VCP

Ensembl

ENSG00000165280, ENSP00000351777, ENST00000358901

ZINC - Predictions - Purchasable

TERA_HUMAN

Orphanet

15706

HMDB Protein

HMDBP11971

Interactors (66)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q9UNZ2 NSFL1C	1	NSFL1C [cytosol] (R-HSA-9714673)	0.951	20
UniProt:Q9BZE9 ASPSCR1	1	ASPSCR1 [cytoplasmic vesicle membrane] (R-HSA-1449582)	0.946	28
UniProt:P68543 UBX2A			0.881	17
UniProt:Q9UKV5 AMFR	1	AMFR [endoplasmic reticulum membrane] (R-HSA-975999)	0.874	12
UniProt:Q9BZV1 UBXN6			0.872	20
UniProt:Q8TAT6 NPLOC4	1	NPLOC4 [nucleoplasm] (R-HSA-5654987)	0.848	9
UniProt:P55072 VCP	8	VCP [endoplasmic reticulum membrane] (R-HSA-8943105) Me3K315-VCP [cytosol] (R-HSA-8932209) VCP [nucleoplasm] (R-HSA-5643745) VCP [ficolin-1-rich granule lumen] (R-HSA-6800425) VCP [azurophil granule lumen] (R-HSA-6800438) VCP [extracellular region] (R-HSA-6806191) VCP [secretory granule lumen] (R-HSA-6801039) VCP [cytosol] (R-HSA-1181251)	0.846	7
UniProt:P54252-1 ATXN3			0.833	18
UniProt:Q96CS3 FAF2	3	FAF2 [extracellular region] (R-HSA-6806183) FAF2 [cytosol] (R-HSA-6781921) FAF2 [azurophil granule lumen] (R-HSA-6799138)	0.776	13
UniProt:O94888 UBXN7	1	UBXN7 [cytosol] (R-HSA-8956071)	0.77	18
UniProt:Q14CS0 UBX2B			0.766	11
UniProt:Q92890 UFD1	1	UFD1L [nucleoplasm] (R-HSA-5654993)	0.743	5
UniProt:Q969W3 F104A			0.718	6
UniProt:P54252 ATXN3	2	ATXN3 [cytosol] (R-HSA-5625607) ATXN3 [nucleoplasm] (R-HSA-6783285)	0.675	4
UniProt:Q92575 UBXN4			0.667	11
UniProt:Q8TBB1 LNX1	1	LNX1 [cytosol] (R-HSA-8851641)	0.666	4
UniProt:Q9H0K1 SIK2			0.666	4
UniProt:P42858 HTT	1	HTT [nucleoplasm] (R-HSA-9023590)	0.666	10
UniProt:Q13617 CUL2	3	CUL2 [cytosol] (R-HSA-416982) G76-NEDD8-K689-CUL2 [cytosol] (R-HSA-8952511) CUL2 [nucleoplasm] (R-HSA-1234126)	0.643	3
UniProt:Q9UNN5-1 FAF1			0.618	4
UniProt:O00124 UBXN8			0.604	8
UniProt:Q96LJ8 UBX10			0.604	7
UniProt:Q9Y4K3 TRAF6	8	TRAF6 [cytosol] (R-HSA-166366) K48polyUb-TRAF6 [cytosol] (R-HSA-6783233) K63polyUb-TRAF6 [cytosol] (R-HSA-2685681) K63polyUb-TRAF6 [plasma membrane] (R-HSA-936980) TRAF6 [plasma membrane] (R-HSA-936955) K63polyUb-TRAF6 [endosome membrane] (R-HSA-450227) TRAF6 [endosome membrane] (R-HSA-450272) PolyUb-TRAF6 [cytosol] (R-HSA-6782845)	0.589	2
UniProt:P63104 YWHAZ	2	YWHAZ [cytosol] (R-HSA-206099) YWHAZ [nucleoplasm] (R-HSA-450469)	0.573	2
UniProt:P62993 GRB2	1	GRB2 [cytosol] (R-HSA-8983328)	0.57	3
UniProt:P09471 GNAO1	1	GNAO1 [plasma membrane] (R-HSA-2997536)	0.556	3
UniProt:Q8NBI5 S43A3			0.556	3
UniProt:O75175 CNOT3	1	CNOT3 [cytosol] (R-HSA-429872)	0.556	3
UniProt:P46977 STT3A	1	STT3A [endoplasmic reticulum membrane] (R-HSA-265023)	0.556	3
UniProt:P25786 PSMA1	2	PSMA1 [cytosol] (R-HSA-68724) PSMA1 [nucleoplasm] (R-HSA-174333)	0.556	3
UniProt:Q96HA8 NTAQ1			0.556	3
UniProt:P26378-2 P263782			0.556	3
UniProt:Q16560-2 SNRNP35			0.556	3
UniProt:Q96J88-3 Q96J883			0.556	3
UniProt:P51668 UBE2D1	3	UBE2D1 [nucleoplasm] (R-HSA-174197) Ub-C85-UBE2D1 [cytosol] (R-HSA-8864160) UBE2D1 [cytosol] (R-HSA-174236)	0.556	3
UniProt:P54253 ATX1			0.556	3
UniProt:Q9Y263 PLAP			0.556	3
UniProt:O60941-5 DTNB			0.556	3
UniProt:Q96LK0 CEP19			0.556	3
UniProt:P62191 PSMC1	2	PSMC1 [cytosol] (R-HSA-68768) PSMC1 [nucleoplasm] (R-HSA-174338)	0.556	3
UniProt:O94941 UBOX5	1	UBOX5 [cytosol] (R-HSA-976034)	0.556	3
UniProt:P24278 ZBT25			0.556	3
UniProt:P32969 RPL9	1	RPL9 [cytosol] (R-HSA-72492)	0.556	3
UniProt:Q9H7H0-2 METTL17			0.556	3
UniProt:Q8WZA0 LZIC			0.556	3
UniProt:Q9Y4L5 RNF115	1	RNF115 [cytosol] (R-HSA-8850904)	0.556	3
UniProt:Q6GPH4 XAF1	1	XAF1 [cytosol] (R-HSA-1015680)	0.556	3
UniProt:Q5VVQ6 YOD1	1	YOD1 [cytosol] (R-HSA-6781909)	0.556	3
UniProt:P63027 VAMP2	23	VAMP2 [clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane] (R-HSA-917738) VAMP2 [clathrin-coated endocytic vesicle membrane] (R-HSA-8869129) VAMP2 [plasma membrane] (R-HSA-210516) VAMP2 [clathrin-sculpted monoamine transport vesicle membrane] (R-HSA-379363) VAMP2 [clathrin-sculpted glutamate transport vesicle membrane] (R-HSA-372517) VAMP2 [clathrin-sculpted glutamate transport vesicle membrane] (R-HSA-210365) VAMP2 [synaptic vesicle membrane] (R-HSA-181517) VAMP2(59-116) [synaptic vesicle membrane] (R-HSA-5250891) VAMP2(2-58) [cytosol] (R-HSA-194815) VAMP2(2-76) [cytosol] (R-HSA-194802) VAMP2(77-116) [synaptic vesicle membrane] (R-HSA-5228355) VAMP2(60-116) [synaptic vesicle membrane] (R-HSA-5250615) VAMP2(2-59) [cytosol] (R-HSA-194797) VAMP2(82-116) [synaptic vesicle membrane] (R-HSA-5250961) VAMP2(2-81) [cytosol] (R-HSA-5250970) VAMP2 [secretory granule membrane] (R-HSA-265198) VAMP2 [cytosol] (R-HSA-9609882) VAMP2 [endoplasmic reticulum membrane] (R-HSA-9609886) VAMP2 [cytoplasmic vesicle membrane] (R-HSA-1449630) VAMP2 [lysosomal membrane] (R-HSA-432703) VAMP2 [Golgi membrane] (R-HSA-375425) VAMP2 [cytoplasmic vesicle membrane] (R-HSA-375436) VAMP2 [secretory granule membrane] (R-HSA-376363)	0.556	3
UniProt:Q07869 PPARA	2	PPARA [nucleoplasm] (R-HSA-400186) SUMO1-K185-PPARA [nucleoplasm] (R-HSA-4341099)	0.556	3
UniProt:Q9BUN8 DERL1	1	DERL1 [endoplasmic reticulum membrane] (R-HSA-6781898)	0.527	2
UniProt:Q96IV0 NGLY1	1	NGLY1 [cytosol] (R-HSA-8850591)	0.527	2
UniProt:P13569 CFTR	17	PolyUb-CFTR [plasma membrane] (R-HSA-8867595) PolyUb-CFTR [clathrin-coated endocytic vesicle membrane] (R-HSA-8869104) CFTR [lysosomal membrane] (R-HSA-5627279) CFTR [Golgi-associated vesicle membrane] (R-HSA-5627079) CFTR [endosome membrane] (R-HSA-6782965) PolyUb-CFTR [endosome membrane] (R-HSA-6782976) CFTR F508del [endoplasmic reticulum membrane] (R-HSA-8866834) ub-CFTR F508del [cytosol] (R-HSA-8866838) ub-CFTR F508del [endoplasmic reticulum membrane] (R-HSA-8866842) CFTR G542* [plasma membrane] (R-HSA-5678986) CFTR G551D [plasma membrane] (R-HSA-5678977) CFTR W1282* [plasma membrane] (R-HSA-5678976) CFTR F508del [plasma membrane] (R-HSA-5678978) CFTR N1303K [plasma membrane] (R-HSA-5678983) CFTR [plasma membrane] (R-HSA-383188) CFTR [endoplasmic reticulum membrane] (R-HSA-8866837) misfolded CFTR [endoplasmic reticulum membrane] (R-HSA-8868730)	0.527	7
UniProt:P04114 APOB	23	APOB(28-2179) [endosome lumen] (R-HSA-174716) APOB(28-4563) [lysosomal lumen] (R-HSA-8876369) APOB(28-2179) [endosome membrane] (R-HSA-174762) APOB(28-4563) [plasma membrane] (R-HSA-171089) APOB(28-4563) [clathrin-coated endocytic vesicle membrane] (R-HSA-171155) APOB(28-4563) [endosome lumen] (R-HSA-171119) APOB(28-4563) [endosome membrane] (R-HSA-171121) APOB(28-2179) [clathrin-coated endocytic vesicle membrane] (R-HSA-174788) APOB(28-2179) [plasma membrane] (R-HSA-174625) APOB(28-2179) [endoplasmic reticulum lumen] (R-HSA-174620) APOB(28-2179) [endoplasmic reticulum membrane] (R-HSA-174637) APOB(28-4563) [smooth endoplasmic reticulum] (R-HSA-8866317) APOB(28-2179) [cytosol] (R-HSA-2395786) APOB(28-2179) [extracellular region] (R-HSA-174770) APOB(28-2179) [early endosome] (R-HSA-2429651) APOB(28-4563) [endocytic vesicle lumen] (R-HSA-2512789) 10xdHF-10xglutamyl semialdehyde (Pro)-6xL-tyrosine residue-3xOxoH-2xmodified L-lysine residue-N'-formyl-L-kynurenine-APOB(28-4563) [endocytic vesicle lumen] (R-HSA-2239461) AcK-APOB(28-4563) [endocytic vesicle lumen] (R-HSA-2239446) AcK-APOB(28-4563) [extracellular region] (R-HSA-2173751) p-APOB(28-4563) [endoplasmic reticulum lumen] (R-HSA-8957068) APOB(28-4563) [endoplasmic reticulum lumen] (R-HSA-6784882) 10xdHF-10xglutamyl semialdehyde (Pro)-6xL-tyrosine residue-3xOxoH-2xmodified L-lysine residue-N'-formyl-L-kynurenine-APOB(28-4563) [extracellular region] (R-HSA-2173702) APOB(28-4563) [extracellular region] (R-HSA-171065)	0.527	2
UniProt:B1AQ61 B1AQ61			0.525	4
UniProt:O96017 CHEK2	3	p-T68-CHEK2 [nucleoplasm] (R-HSA-113825) p-S,3T-CHEK2 [nucleoplasm] (R-HSA-5683784) CHEK2 [nucleoplasm] (R-HSA-113824)	0.524	2
UniProt:P26045 PTPN3	3	p-S459 PTPN3 [cytosol] (R-HSA-8868111) PTPN3 [plasma membrane] (R-HSA-5490317) PTPN3 [cytosol] (R-HSA-8867650)	0.524	2
UniProt:O94868 FCSD2			0.508	2
UniProt:Q13619 CUL4A	2	CUL4A [nucleoplasm] (R-HSA-976006) G76-NEDD8-K705-CUL4A [nucleoplasm] (R-HSA-8952514)	0.499	2
UniProt:Q9UNN5 FAF1			0.499	2
UniProt:P62136 PPP1CA	1	PPP1CA [cytosol] (R-HSA-163525)	0.499	2
UniProt:Q9WTX6 Cul1	3	Cul1 [nucleoplasm] (R-MMU-9008723) Cul1 [cytosol] (R-MMU-8952519) Cul1 [cytosol] (R-MMU-174230)	0.499	2
UniProt:Q92569 PIK3R3	2	K63polyUb-PIK3R3 [cytosol] (R-HSA-3080574) PIK3R3 [cytosol] (R-HSA-205223)	0.488	2
UniProt:Q5T124-6 UBXN11			0.471	7
UniProt:P04578-PRO_0000038428 ENV			0.462	2
UniProt:Q86TM6 SYVN1	1	SYVN1(1-617) [endoplasmic reticulum membrane] (R-HSA-535496)	0.462	2

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