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RCL1 [nucleoplasm]
Stable Identifier
R-HSA-6790711
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
RNA 3'-terminal phosphate cyclase-like protein, RCL1_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
rRNA processing (Homo sapiens)
rRNA processing in the nucleus and cytosol (Homo sapiens)
Major pathway of rRNA processing in the nucleolus and cytosol (Homo sapiens)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Homo sapiens)
18SE pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
30S pre-rRNA is nucleolytically processed at site 1 to yield 21S pre-rRNA (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
45S pre-rRNA is nucleolytically processed at site 2 (site 2b) to yield 30S pre-rRNA and 32S pre-rRNA (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
47S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
rRNA modification in the nucleus and cytosol (Homo sapiens)
EMG1 of the SSU processome methylates pseudouridine-1248 of 18S rRNA yielding N(1)-methylpseudouridine-1248 (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
RCL1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9Y2P8 RCL1
Gene Names
RCL1, RNAC, RPC2, RPCL1, RTC2, HSPC338
Chain
chain:1-373
Reference Genes
BioGPS Gene:10171 RCL1
COSMIC (genes):RCL1 RCL1
CTD Gene:10171 RCL1
dbSNP Gene:10171 RCL1
ENSEMBL:ENSG00000120158 RCL1
HGNC:17687 RCL1
Monarch:10171 RCL1
NCBI Gene:10171 RCL1
OMIM:611405 RCL1
UCSC:Q9Y2P8 RCL1
Reference Transcript
RefSeq:NM_001286699.1 RCL1
RefSeq:XM_011517673.2 RCL1
RefSeq:XM_017014176.1 RCL1
RefSeq:NM_001286700.1 RCL1
RefSeq:NM_001286701.1 RCL1
RefSeq:NM_005772.4 RCL1
Other Identifiers
10171
11756210_a_at
17083295
17083315
218544_PM_s_at
218544_s_at
222666_PM_s_at
222666_s_at
233981_PM_at
233981_at
3160782
3160783
3160784
3160797
3160799
3160800
3160804
3160805
3160807
3160808
3160809
3160810
3160814
3160815
3160816
3160818
3160824
3160825
3160832
3160833
3160834
3160835
3160844
3160848
3160850
3160851
3160871
48502_at
8154163
8154176
91398_at
A_14_P123360
A_14_P201754
A_33_P3228295
A_33_P3228300
GE58380
GO:0000447
GO:0000479
GO:0000480
GO:0003824
GO:0004521
GO:0005515
GO:0005634
GO:0005654
GO:0005730
GO:0006396
GO:0008150
GO:0016787
GO:0032040
GO:0042254
GO:0042274
GO:0043226
GO:0140098
HMNXSV003023315
HMNXSV003034806
HMNXSV003049792
HMNXSV003050670
Hs.113052.1.S1_3p_x_at
ILMN_1813766
PH_hs_0006223
TC09000032.hg
TC09000033.hg
g12654400_3p_a_at
g5032042_3p_a_at
g5032042_3p_x_at
p16690
Participates
as a component of
BMS1:RCL1 [nucleoplasm] (Homo sapiens)
Inferred To
Rcl1 [nucleoplasm]
(Mus musculus)
Rcl1 [nucleoplasm]
(Rattus norvegicus)
Rtc1 [nucleoplasm]
(Drosophila melanogaster)
RCL1 [nucleoplasm]
(Bos taurus)
RCL1 [nucleoplasm]
(Caenorhabditis elegans)
RCL1 [nucleoplasm]
(Canis familiaris)
RCL1 [nucleoplasm]
(Gallus gallus)
RCL1 [nucleoplasm]
(Plasmodium falciparum)
RCL1 [nucleoplasm]
(Saccharomyces cerevisiae)
RCL1 [nucleoplasm]
(Schizosaccharomyces pombe)
Ghost homologue of RCL1 [nucleoplasm]
(Sus scrofa)
rcl1 [nucleoplasm]
(Dictyostelium discoideum)
Cross References
ENSEMBL
ENST00000381730
,
ENST00000381750
,
ENSP00000388096
,
ENST00000381728
,
ENSP00000371149
,
ENSP00000371147
,
ENSP00000371169
,
ENST00000448872
OpenTargets
ENSG00000120158
HPA
ENSG00000120158-RCL1
PRO
Q9Y2P8
Pharos - Targets
Q9Y2P8
GlyGen
Q9Y2P8
PDB
7MQA
,
7MQ8
,
7MQ9
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q08379 GOLGA2
3
p-S37-GOLGA2 [Golgi membrane]
(R-HSA-2172179)
GOLGA2 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(R-HSA-2167933)
GOLGA2 [Golgi membrane]
(R-HSA-6808764)
0.556
3
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