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CIRH1A [nucleoplasm]
Stable Identifier
R-HSA-6790662
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Cirhin, CIR1A_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
rRNA processing (Homo sapiens)
rRNA processing in the nucleus and cytosol (Homo sapiens)
Major pathway of rRNA processing in the nucleolus and cytosol (Homo sapiens)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Homo sapiens)
18SE pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
30S pre-rRNA is nucleolytically processed at site 1 to yield 21S pre-rRNA (Homo sapiens)
21S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
45S pre-rRNA is nucleolytically processed at site 2 (site 2b) to yield 30S pre-rRNA and 32S pre-rRNA (Homo sapiens)
30S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA (Homo sapiens)
45S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
47S pre-rRNA:SSU processome [nucleoplasm] (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
rRNA modification in the nucleus and cytosol (Homo sapiens)
EMG1 of the SSU processome methylates pseudouridine-1248 of 18S rRNA yielding N(1)-methylpseudouridine-1248 (Homo sapiens)
SSU Processome [nucleoplasm] (Homo sapiens)
UTPA complex [nucleoplasm] (Homo sapiens)
CIRH1A [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q969X6 UTP4
Gene Names
UTP4, CIRH1A, cPERP-E, KIAA1988
Chain
chain:1-686
Reference Genes
BioGPS Gene:84916 UTP4
COSMIC (genes):UTP4 UTP4
CTD Gene:84916 UTP4
dbSNP Gene:84916 UTP4
ENSEMBL:ENSG00000141076 UTP4
HGNC:1983 UTP4
Monarch:84916 UTP4
NCBI Gene:84916 UTP4
OMIM:607456 UTP4
UCSC:Q969X6 UTP4
Reference Transcript
RefSeq:NM_032830.2 UTP4
Other Identifiers
11717511_a_at
16820537
224903_PM_at
224903_at
230656_PM_s_at
230656_s_at
3666567
3666568
3666569
3666570
3666572
3666573
3666574
3666575
3666576
3666578
3666579
3666580
3666581
3666582
3666583
3666584
3666586
3666587
3666588
3666589
3666590
3666591
3666592
3666593
3666594
3666595
3666596
3666597
3666598
3666599
3666600
3666619
3666620
53874_at
63117_at
63252_i_at
63253_r_at
73411_at
7996891
84916
A_14_P110318
A_14_P132709
A_23_P54626
A_24_P25346
GE86868
GO:0000462
GO:0001650
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005730
GO:0006355
GO:0006364
GO:0030490
GO:0030686
GO:0032040
GO:0034455
GO:0042254
GO:0042274
GO:0043226
HMNXSV003038341
Hs.151001.1.S1_3p_a_at
ILMN_1796235
PH_hs_0009098
TC16000564.hg
p6476
Participates
as a component of
UTPA complex [nucleoplasm] (Homo sapiens)
Inferred To
Ghost homologue of CIRH1A [nucleoplasm]
(Dictyostelium discoideum)
l(3)72Dn [nucleoplasm]
(Drosophila melanogaster)
CIRH1A [nucleoplasm]
(Caenorhabditis elegans)
CIRH1A [nucleoplasm]
(Gallus gallus)
CIRH1A [nucleoplasm]
(Plasmodium falciparum)
Utp4 [nucleoplasm]
(Mus musculus)
Utp4 [nucleoplasm]
(Rattus norvegicus)
utp4 [nucleoplasm]
(Schizosaccharomyces pombe)
UTP4 [nucleoplasm]
(Bos taurus)
UTP4 [nucleoplasm]
(Canis familiaris)
UTP4 [nucleoplasm]
(Saccharomyces cerevisiae)
UTP4 [nucleoplasm]
(Sus scrofa)
Cross References
ENSEMBL
ENST00000314423
,
ENSP00000327179
,
ENST00000352319
,
ENST00000575702
,
ENSP00000458843
,
ENST00000563094
,
ENSP00000456622
,
ENSP00000339164
OpenTargets
ENSG00000141076
HPA
ENSG00000141076-UTP4
PRO
Q969X6
Pharos - Targets
Q969X6
GlyGen
Q969X6
Orphanet
UTP4
PDB
7MQA
,
7MQ9
,
7MQ8
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9H8H0 NOL11
1
NOL11 [nucleoplasm]
(R-HSA-6790684)
0.768
10
UniProt:Q8TDQ0 HAVCR2
1
HAVCR2 [plasma membrane]
(R-HSA-5340408)
0.527
2
UniProt:P50552 VASP
1
VASP [cytosol]
(R-HSA-446323)
0.527
2
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