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SNRNP48 [nucleoplasm]
Stable Identifier
R-HSA-6787849
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
U11/U12 small nuclear ribonucleoprotein 48 kDa protein, SNR48_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Minor Pathway (Homo sapiens)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Homo sapiens)
ATAC C Complex with lariat containing 5'-end cleaved mRNA [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Homo sapiens)
ATAC C Complex [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
ATAC C Complex with lariat containing 5'-end cleaved mRNA [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
Formation of AT-AC A complex (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
Formation of AT-AC B Complex (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
ATAC B Complex [nucleoplasm] (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
Formation of AT-AC C complex (Homo sapiens)
ATAC B Complex [nucleoplasm] (Homo sapiens)
ATAC A Complex [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
ATAC C Complex [nucleoplasm] (Homo sapiens)
U11 snRNP [nucleoplasm] (Homo sapiens)
SNRNP48 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q6IEG0 SNRNP48
Gene Names
SNRNP48, C6orf151
Chain
chain:1-339
Reference Genes
BioGPS Gene:154007 SNRNP48
COSMIC (genes):SNRNP48 SNRNP48
CTD Gene:154007 SNRNP48
dbSNP Gene:154007 SNRNP48
ENSEMBL:ENSG00000168566 SNRNP48
ENSEMBL:ENSG00000168566.13 SNRNP48
HGNC:21368 SNRNP48
KEGG Gene (Homo sapiens):154007 SNRNP48
Monarch:154007 SNRNP48
NCBI Gene:154007 SNRNP48
UCSC:Q6IEG0 SNRNP48
Reference Transcript
RefSeq:NM_152551.3 SNRNP48
Other Identifiers
11736318_a_at
11736319_at
11758437_s_at
154007
1553274_PM_a_at
1553274_a_at
17004642
226263_PM_at
226263_at
2893848
2893849
2893852
2893853
2893854
2893859
2893860
2893861
2893863
2893864
2893865
2893869
2893870
2893871
2893872
2893873
65176_at
8116807
A_23_P306234
A_24_P46725
A_33_P3404448
GE545970
GE87772
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005689
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0043226
GO:0046872
HMNXSV003003382
Hs.13366.0.S1_3p_at
Hs2.13366.1.S1_3p_s_at
ILMN_1754304
PH_hs_0001289
TC06000061.hg
TC06002564.hg
Participates
as a component of
U11 snRNP [nucleoplasm] (Homo sapiens)
Inferred To
Ghost homologue of SNRNP48 [nucleoplasm]
(Caenorhabditis elegans)
Ghost homologue of SNRNP48 [nucleoplasm]
(Drosophila melanogaster)
snrnp48 [nucleoplasm]
(Xenopus tropicalis)
Snrnp48 [nucleoplasm]
(Rattus norvegicus)
SNRNP48 [nucleoplasm]
(Bos taurus)
SNRNP48 [nucleoplasm]
(Canis familiaris)
SNRNP48 [nucleoplasm]
(Gallus gallus)
SNRNP48 [nucleoplasm]
(Mus musculus)
SNRNP48 [nucleoplasm]
(Sus scrofa)
fd10a06 [nucleoplasm]
(Danio rerio)
Cross References
RefSeq
NP_689764.3
OpenTargets
ENSG00000168566
HPA
ENSG00000168566-SNRNP48
GeneCards
Q6IEG0
Ensembl
ENST00000342415
,
ENSG00000168566
,
ENSP00000339834
PRO
Q6IEG0
Pharos - Targets
Q6IEG0
PDB
2VY4
,
2VY5
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