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RTCB [nucleoplasm]
Stable Identifier
R-HSA-5696792
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
fullName evidence="2"tRNA-splicing ligase RtcB homolog ecNumber evidence="2"6.5.1.3/ecNumber, RTCB_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
tRNA processing (Homo sapiens)
tRNA processing in the nucleus (Homo sapiens)
tRNA ligase complex ligates tRNA exons (Homo sapiens)
tRNA ligase complex [nucleoplasm] (Homo sapiens)
RTCB [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9Y3I0 RTCB
Gene Names
RTCB, C22orf28, HSPC117
Chain
chain:1-505
Reference Genes
BioGPS Gene:51493 RTCB
COSMIC (genes):RTCB RTCB
CTD Gene:51493 RTCB
dbSNP Gene:51493 RTCB
ENSEMBL:ENSG00000100220 RTCB
HGNC:26935 RTCB
KEGG Gene (Homo sapiens):51493 RTCB
Monarch:51493 RTCB
NCBI Gene:51493 RTCB
OMIM:613901 RTCB
UCSC:Q9Y3I0 RTCB
Reference Transcript
RefSeq:NM_014306.4 RTCB
Other Identifiers
0004210132
11715645_s_at
11749368_a_at
11751754_a_at
11752603_a_at
11752604_s_at
16934227
18671579
18671580
18671581
18671582
18671583
18671584
18671585
18671586
18671589
18671590
18671594
18671595
18671596
18671597
200042_PM_at
200042_at
38689_at
3958254
3958255
3958258
3958261
3958262
3958263
3958266
3958267
3958269
3958273
3958276
3958278
3958279
3958281
3958282
3958283
51493
7892757
7893297
7893619
7893700
7893816
7894188
7894903
7895016
7895031
7895090
7895846
7896069
7896324
7896608
8075585
A_23_P68889
A_23_P68892
GE60554
GO:0000166
GO:0000971
GO:0003674
GO:0003723
GO:0003972
GO:0005515
GO:0005525
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0005737
GO:0005829
GO:0006388
GO:0006396
GO:0006399
GO:0008033
GO:0008092
GO:0008150
GO:0008452
GO:0016874
GO:0016886
GO:0017166
GO:0032991
GO:0034641
GO:0043167
GO:0043226
GO:0043231
GO:0046872
GO:0072669
HMNXSV003009254
ILMN_1795991
PH_hs_0023368
TC22000682.hg
g7657014_3p_at
Participates
as a component of
tRNA ligase complex [nucleoplasm] (Homo sapiens)
Cross References
RefSeq
NP_055121.1
OpenTargets
ENSG00000100220
HPA
ENSG00000100220-RTCB
GeneCards
Q9Y3I0
Ensembl
ENSP00000216038
,
ENST00000216038
,
ENSG00000100220
PRO
Q9Y3I0
Pharos - Targets
Q9Y3I0
GlyGen
Q9Y3I0
HMDB Protein
HMDBP11927
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9UKG1 APPL1
1
APPL1 [endosome membrane]
(R-HSA-373630)
0.57
3
UniProt:P0DTC9 N
13
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [plasma membrane]
(R-COV-9729325)
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [nucleolus]
(R-COV-9729339)
N [plasma membrane]
(R-COV-9694356)
SUMO1-K62,ADPr-,p-11S,2T,met-R95,177,Ac-K375-N [cytosol]
(R-COV-9756489)
N [cytosol]
(R-COV-9694300)
p-S188,206-N [cytosol]
(R-COV-9729324)
p-8S-N [cytosol]
(R-COV-9729335)
p-8S,2T-N [cytosol]
(R-COV-9729277)
p-11S,2T-N [cytosol]
(R-COV-9729264)
p-11S,2T-metR95,177-N [cytosol]
(R-COV-9729308)
ADPr-p-11S,2T-metR95,177-N [cytosol]
(R-COV-9729275)
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [endoplasmic reticulum-Golgi intermediate compartment membrane]
(R-COV-9729341)
SUMO1-K62-ADPr-p-11S,2T-metR95,177-N [cytosol]
(R-COV-9729340)
0.527
2
UniProt:P03496 NS
2
NS1 [nucleoplasm]
(R-FLU-169113)
NS1 [cytosol]
(R-FLU-169118)
0.527
3
UniProt:P46108 CRK
1
CRK [cytosol]
(R-HSA-2980677)
0.488
2
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