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5Hyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
Stable Identifier
R-HSA-5689769
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum-Golgi intermediate compartment membrane
Synonyms
5-hydroxylysyl collagen alpha-1(VII) chain, COL7A1, CO7A1_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of proteins (Homo sapiens)
Post-translational protein modification (Homo sapiens)
Asparagine N-linked glycosylation (Homo sapiens)
Transport to the Golgi and subsequent modification (Homo sapiens)
ER to Golgi Anterograde Transport (Homo sapiens)
COPII-mediated vesicle transport (Homo sapiens)
BET1:GOSR2:STX5 bind v-SNARES on tethered vesicle (Homo sapiens)
COPII cargo:receptors [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
procollagen VII:SEC24C:SEC23A [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
Procollagen type VII [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
Alpha-1(VII) chains [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
5Hyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
Vesicle-mediated transport (Homo sapiens)
Membrane Trafficking (Homo sapiens)
ER to Golgi Anterograde Transport (Homo sapiens)
COPII-mediated vesicle transport (Homo sapiens)
BET1:GOSR2:STX5 bind v-SNARES on tethered vesicle (Homo sapiens)
COPII cargo:receptors [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
procollagen VII:SEC24C:SEC23A [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
Procollagen type VII [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
Alpha-1(VII) chains [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
5Hyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q02388 COL7A1
Gene Names
COL7A1
Chain
signal peptide:1-16, chain:17-2944
Reference Genes
BioGPS Gene:1294 COL7A1
COSMIC (genes):COL7A1 COL7A1
CTD Gene:1294 COL7A1
dbSNP Gene:1294 COL7A1
ENSEMBL:ENSG00000114270 COL7A1
HGNC:2214 COL7A1
KEGG Gene (Homo sapiens):1294 COL7A1
Monarch:1294 COL7A1
NCBI Gene:1294 COL7A1
OMIM:120120 COL7A1
UCSC:Q02388 COL7A1
Reference Transcript
RefSeq:XM_011533337.1 COL7A1
RefSeq:NM_000094.3 COL7A1
Other Identifiers
0005130047
11721705_at
1294
16953458
204136_at
217312_s_at
2673347
2673348
2673350
2673353
2673354
2673356
2673357
2673359
2673360
2673361
2673362
2673363
2673364
2673365
2673366
2673368
2673370
2673371
2673372
2673373
2673374
2673376
2673378
2673380
2673381
2673382
2673383
2673385
2673388
2673389
2673392
2673394
2673396
2673397
2673399
2673400
2673401
2673402
2673403
2673404
2673405
2673406
2673407
2673408
2673409
2673411
2673414
2673416
2673417
2673418
2673419
2673420
2673421
2673422
2673423
2673424
2673425
2673426
2673428
2673429
2673431
2673432
2673434
2673435
2673436
2673437
2673439
2673440
2673441
2673442
2673443
2673445
2673446
2673447
2673448
2673449
2673450
2673451
2673452
2673453
2673454
2673455
2673456
2673457
2673459
2673460
2673461
2673462
2673463
2673464
2673465
2673466
2673467
2673469
2673470
2673471
2673472
2673473
2673474
2673475
2673477
2673478
2673479
2673480
2673482
2673483
2673484
2673485
2673486
2673487
2673489
2673490
2673492
2673493
2673494
2673495
2673496
2673497
2673498
2673499
2673500
32123_at
8086985
GE57549
GO:0000139
GO:0003674
GO:0004867
GO:0005198
GO:0005515
GO:0005575
GO:0005576
GO:0005581
GO:0005590
GO:0005604
GO:0005615
GO:0005622
GO:0005737
GO:0005783
GO:0005788
GO:0005794
GO:0006810
GO:0006888
GO:0007155
GO:0008150
GO:0008544
GO:0009790
GO:0010466
GO:0010951
GO:0016192
GO:0022607
GO:0030020
GO:0030134
GO:0030154
GO:0030198
GO:0030234
GO:0030414
GO:0031012
GO:0031410
GO:0032991
GO:0033116
GO:0035987
GO:0043226
GO:0048208
GO:0048646
GO:0048856
GO:0061024
GO:0062023
GO:0065003
HMNXSV003035647
Hs.1640.1.S1_3p_a_at
ILMN_1751161
PH_hs_0000224
TC03001382.hg
g4502960_3p_at
Participates
as a member of
Alpha-1(VII) chains [endoplasmic reticulum-Golgi intermediate compartment membrane] (Homo sapiens)
Other forms of this molecule
3x4Hyp-3Hyp-5Hyl-COL7A1(2822-2944) [extracellular region]
5Hyl-COL7A1(2822-2944) [extracellular region]
3x4Hyp-3Hyp-COL7A1(2822-2944) [extracellular region]
3x4Hyp-5Hyl-COL7A1(2822-2944) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL7A1(2822-2944) [extracellular region]
COL7A1(2822-2944) [extracellular region]
3x4Hyp-GlcGalHyl-COL7A1(2822-2944) [extracellular region]
3x4Hyp-GalHyl-COL7A1(2822-2944) [extracellular region]
3x4Hyp-COL7A1(2822-2944) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1(2822-2944) [extracellular region]
GlcGalHyl-COL7A1(2822-2944) [extracellular region]
GalHyl-COL7A1(2822-2944) [extracellular region]
COL7A1 [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1 [extracellular region]
GalHyl-COL7A1 [extracellular region]
3x4Hyp-3Hyp-COL7A1 [extracellular region]
3x4Hyp-COL7A1 [extracellular region]
3x4Hyp-5Hyl-COL7A1 [extracellular region]
GlcGalHyl-COL7A1 [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL7A1 [extracellular region]
3x4Hyp-GlcGalHyl-COL7A1 [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL7A1 [extracellular region]
5Hyl-COL7A1 [extracellular region]
3x4Hyp-GalHyl-COL7A1 [extracellular region]
3x4Hyp-GalHyl-COL7A1(?-2944) [extracellular region]
3x4Hyp-GlcGalHyl-COL7A1(17-?) [extracellular region]
3x4Hyp-3Hyp-COL7A1(?-2944) [extracellular region]
3x4Hyp-COL7A1(?-2944) [extracellular region]
GlcGalHyl-COL7A1(17-?) [extracellular region]
3x4Hyp-5Hyl-COL7A1(?-2944) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL7A1(?-2944) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL7A1(17-?) [extracellular region]
GalHyl-COL7A1(?-2944) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL7A1(?-2944) [extracellular region]
COL7A1(17-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1(?-2944) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1(17-?) [extracellular region]
COL7A1(?-2944) [extracellular region]
3x4Hyp-COL7A1(17-?) [extracellular region]
3x4Hyp-3Hyp-COL7A1(17-?) [extracellular region]
GalHyl-COL7A1(17-?) [extracellular region]
GlcGalHyl-COL7A1(?-2944) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL7A1(17-?) [extracellular region]
3x4Hyp-5Hyl-COL7A1(17-?) [extracellular region]
3x4Hyp-GalHyl-COL7A1(17-?) [extracellular region]
3x4Hyp-GlcGalHyl-COL7A1(?-2944) [extracellular region]
5Hyl-COL7A1(?-2944) [extracellular region]
5Hyl-COL7A1(17-?) [extracellular region]
3x4Hyp-5Hyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-3Hyp-5Hyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
GalHyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
GlcGalHyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-3Hyp-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-GalHyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-3Hyp-GalHyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-GlcGalHyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
5Hyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-5Hyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
GlcGalHyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-3Hyp-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-GalHyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-3Hyp-GalHyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
GalHyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-GlcGalHyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-3Hyp-5Hyl-COL7A1 [COPII-coated ER to Golgi transport vesicle]
3x4Hyp-GlcGalHyl-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL7A1 [endoplasmic reticulum lumen]
GalHyl-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL7A1(17-2821) [extracellular region]
GalHyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-3Hyp-COL7A1(17-2821) [extracellular region]
5Hyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1(17-2821) [extracellular region]
COL7A1(17-2821) [extracellular region]
3x4Hyp-5Hyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-GlcGalHyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-COL7A1(17-2821) [extracellular region]
GlcGalHyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL7A1(17-2821) [extracellular region]
3x4Hyp-3Hyp-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL7A1 [endoplasmic reticulum lumen]
5Hyl-COL7A1 [endoplasmic reticulum lumen]
COL7A1 [endoplasmic reticulum lumen]
GlcGalHyl-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL7A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL7A1 [endoplasmic reticulum lumen]
Inferred To
COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(Canis familiaris)
COL7A1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(Sus scrofa)
col7a1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(Danio rerio)
Col7a1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(Mus musculus)
Col7a1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(Rattus norvegicus)
Modified Residues
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
NP_000085.1
,
XP_011531639.1
OpenTargets
ENSG00000114270
HPA
ENSG00000114270-COL7A1
GeneCards
Q02388
Ensembl
ENST00000328333
,
ENSP00000332371
,
ENSG00000114270
PRO
Q02388
Orphanet
15781
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q5JRA6 MIA3
3
p-MIA3 [endoplasmic reticulum lumen]
(R-HSA-8957064)
MIA3 [endoplasmic reticulum membrane]
(R-HSA-5689472)
MIA3 [endoplasmic reticulum lumen]
(R-HSA-8956743)
0.524
2
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