Reactome | HOXA1 gene is transcribed

HOXA1 gene is transcribed

Stable Identifier

R-HSA-5617471

Type

Reaction [omitted]

Species

Homo sapiens

Compartment

nucleoplasm, cytosol

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After activation by retinoic acid, the HOXA1 gene is transcribed to yield mRNA (inferred from mouse embryos, also demonstrated in human cancer cells, Chariot et al. 1995, Xu et al. 2014). The mRNA is a target of the microRNAs miR-10a in megakaryocytes (Garzon et al. 2006), miR210 in tumors (Huang et al. 2009), let-7c in non-small cell lung cancer cells (Zhan et al. 2013), miR-99 in epithelial cells (Chen et al. 2013), and miR-100 in tumor cells (Chen et al. 2014), however it is unknown if these play a role in embryogenesis. Opposite strand intergenic transcripts are also observed in adult tissues and placenta (Sessa et al. 2007).
In mouse embryos, expression of Hoxa1 occurs in the neural tube, adjacent mesenchyme, paraxial mesoderm, somites, and gut epithelium from rhombomere 4 to the caudal-most region of the embryo. (Rhombomeres are transiently formed segments in the neural tube that will eventually form the hindbrain.)

Literature References

PubMed ID	Title	Journal	Year
25135475	CTCF Controls HOXA Cluster Silencing and Mediates PRC2-Repressive Higher-Order Chromatin Structure in NT2/D1 Cells Xu, M, Zhao, GN, Lv, X, Liu, G, Wang, LY, Hao, DL, Wang, J, Liu, DP, Liang, CC	Mol. Cell. Biol.	2014
19115252	The truncated Hoxa1 protein interacts with Hoxa1 and Pbx1 in stem cells Fernandez, CC, Gudas, LJ	J. Cell. Biochem.	2009
16549775	MicroRNA fingerprints during human megakaryocytopoiesis Garzon, R, Pichiorri, F, Palumbo, T, Iuliano, R, Cimmino, A, Aqeilan, RI, Volinia, S, Bhatt, D, Alder, H, Marcucci, G, Calin, GA, Liu, CG, Bloomfield, CD, Andreeff, M, Croce, CM	Proc. Natl. Acad. Sci. U.S.A.	2006
23534758	Let-7c inhibits NSCLC cell proliferation by targeting HOXA1 Zhan, M, Qu, Q, Wang, G, Liu, YZ, Tan, SL, Lou, XY, Yu, J, Zhou, HH	Asian Pac. J. Cancer Prev.	2013
24312487	MicroRNA-99 family members suppress Homeobox A1 expression in epithelial cells Chen, D, Chen, Z, Jin, Y, Dragas, D, Zhang, L, Adjei, BS, Wang, A, Dai, Y, Zhou, X	PLoS ONE	2013
24586203	miR-100 induces epithelial-mesenchymal transition but suppresses tumorigenesis, migration and invasion Chen, D, Sun, Y, Yuan, Y, Han, Z, Zhang, P, Zhang, J, You, MJ, Teruya-Feldstein, J, Wang, M, Gupta, S, Hung, MC, Liang, H, Ma, L	PLoS Genet.	2014
19782034	Hypoxia-inducible mir-210 regulates normoxic gene expression involved in tumor initiation Huang, X, Ding, L, Bennewith, KL, Tong, RT, Welford, SM, Ang, KK, Story, M, Le, QT, Giaccia, AJ	Mol. Cell	2009
17185360	Noncoding RNA synthesis and loss of Polycomb group repression accompanies the colinear activation of the human HOXA cluster Sessa, L, Breiling, A, Lavorgna, G, Silvestri, L, Casari, G, Orlando, V	RNA	2007
7488013	Retinoic acid induces three newly cloned HOXA1 transcripts in MCF7 breast cancer cells Chariot, A, Moreau, L, Senterre, G, Sobel, ME, Castronovo, V	Biochem. Biophys. Res. Commun.	1995