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glc-fuc-SEMA5B(27-1093) [endoplasmic reticulum lumen]
Stable Identifier
R-HSA-5172983
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum lumen
Synonyms
O-fuc-SEMA5B(27-1093), SEMA5B(27-1093), SEMA5B, Semaphorin 5B precursor, SM5B_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of proteins (Homo sapiens)
Post-translational protein modification (Homo sapiens)
O-linked glycosylation (Homo sapiens)
O-glycosylation of TSR domain-containing proteins (Homo sapiens)
B3GALTL transfers glucose to O-fucosyl-proteins (Homo sapiens)
glc-fuc-proteins [endoplasmic reticulum lumen] (Homo sapiens)
glc-fuc-SEMA5B(27-1093) [endoplasmic reticulum lumen] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9P283 SEMA5B
Gene Names
SEMA5B, KIAA1445, SEMAG, UNQ5867/PRO34001
Chain
chain:1-1151
Reference Genes
BioGPS Gene:54437 SEMA5B
COSMIC (genes):SEMA5B SEMA5B
CTD Gene:54437 SEMA5B
dbSNP Gene:54437 SEMA5B
ENSEMBL:ENSG00000082684 SEMA5B
ENSEMBL_homo_sapiens_GENE:ENSG00000082684.16 SEMA5B
HGNC:10737 SEMA5B
KEGG Gene (Homo sapiens):54437 SEMA5B
Monarch:54437 SEMA5B
NCBI Gene:54437 SEMA5B
OMIM:609298 SEMA5B
UCSC:Q9P283 SEMA5B
Reference Transcript
RefSeq:NM_001256347.1 SEMA5B
RefSeq:NM_001256346.1 SEMA5B
RefSeq:NM_001031702.3 SEMA5B
Other Identifiers
11726847_a_at
11726848_a_at
11749463_a_at
11749464_x_at
11757034_a_at
16958161
223610_PM_at
223610_at
2692205
2692206
2692207
2692208
2692209
2692210
2692211
2692212
2692213
2692214
2692215
2692219
2692221
2692223
2692224
2692228
2692229
2692231
2692232
2692234
2692235
2692237
2692238
2692242
2692243
2692244
2692245
2692246
2692247
2692248
2692259
2692263
2692266
2692267
2692269
2692270
2692272
2692274
53632_at
54437
8090044
A_23_P121374
A_33_P3365228
GE55724
GO:0001755
GO:0005515
GO:0007399
GO:0007411
GO:0016020
GO:0023052
GO:0030154
GO:0030215
GO:0030335
GO:0045499
GO:0048018
GO:0048675
GO:0048843
GO:0048856
GO:0048870
GO:0050877
GO:0050908
GO:0050919
GO:0071526
GO:0097485
GO:0098772
GO:1990138
HMNXSV003047253
ILMN_1794370
PH_hs_0003897
TC03001708.hg
g12803864_3p_at
Participates
as a candidate of
glc-fuc-proteins [endoplasmic reticulum lumen] (Homo sapiens)
Other forms of this molecule
SEMA5B(27-1093) [endoplasmic reticulum lumen]
O-fuc-SEMA5B(27-1093) [endoplasmic reticulum lumen]
Inferred To
sema5ba [endoplasmic reticulum lumen]
(Danio rerio)
glc-fuc-SEMA5B(27-1093) [endoplasmic reticulum lumen]
(Gallus gallus)
Sema5c [endoplasmic reticulum lumen]
(Drosophila melanogaster)
Sema5b [endoplasmic reticulum lumen]
(Mus musculus)
Sema5b [endoplasmic reticulum lumen]
(Rattus norvegicus)
SEMA5B [endoplasmic reticulum lumen]
(Bos taurus)
SEMA5B [endoplasmic reticulum lumen]
(Canis familiaris)
SEMA5B [endoplasmic reticulum lumen]
(Sus scrofa)
Modified Residues
Name
O-fucosyl-L-serine (ChEBI:76521) at unknown position
Modification
beta-D-glucosyl-(1->3)-alpha-L-fucosyl group
PsiMod Name
O-fucosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to an O-fucosylserine.
Cross References
RefSeq
NP_001026872.2
,
NP_001243275.1
,
NP_001243276.1
OpenTargets
ENSG00000082684
HPA
ENSG00000082684-SEMA5B
GeneCards
Q9P283
Ensembl
ENST00000451055
,
ENST00000616742
,
ENST00000357599
,
ENSP00000350215
,
ENSP00000479602
,
ENSP00000389588
,
ENSG00000082684
PRO
Q9P283
Pharos - Targets
Q9P283
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