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SOX2 [nucleoplasm]
Stable Identifier
R-HSA-452271
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Transcription factor SOX-2, SOX2_HUMAN
Icon
Locations in the PathwayBrowser for interactor UniProt:P39880 CUX1
Expand all
Developmental Biology (Homo sapiens)
Gastrulation (Homo sapiens)
Formation of the anterior neural plate (Homo sapiens)
Expression of SOX2 in anterior neural plate (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
SOX2 binds the ZEB2 gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
Formation of the posterior neural plate (Homo sapiens)
Expression of GBX2 in posterior neural plate (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
Expression of SOX2 in posterior neural plate (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
SOX2 binds the ZEB2 gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
Germ layer formation at gastrulation (Homo sapiens)
p-2S-SMAD2,3:SMAD4, CTNNB1, and TBPL2 bind FOXH1:SMAD3:EOMES gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
Specification of the neural plate border (Homo sapiens)
POU5F1 and SOX2 bind the ZIC1 gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
TFAP2A:TFAP2C, POU5F1, SOX2 and MYB bind the PAX7 gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
MITF-M-regulated melanocyte development (Homo sapiens)
Transcriptional and post-translational regulation of MITF-M expression and activity (Homo sapiens)
SOX2 binds the MITF promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
Transcriptional regulation of pluripotent stem cells (Homo sapiens)
Expression of SOX2 (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG Bind the SALL1 Promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind DPPA4 gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the EPHA1 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the FGF2 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the FOXD3 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the STAT3 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the TDGF1 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the ZIC3 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the SOX2 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG repress genes related to differentiation (Homo sapiens)
POU5F1 (OCT4), NANOG bind the CDX2 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the DKK1 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the EOMES promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the GSC promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the HHEX promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the TSC22D1 promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG, KLF4, PBX1, SMAD2 bind the NANOG promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG, ZSCAN10, PRDM14, SMAD2, FOXP1-ES bind the POU5F1 (OCT4) promoter (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
Generic Transcription Pathway (Homo sapiens)
Transcriptional Regulation by MECP2 (Homo sapiens)
MECP2 and SOX2 bind MIR137 gene (Homo sapiens)
SOX2 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P48431 SOX2
Gene Names
SOX2
Chain
chain:1-317
Reference Genes
BioGPS Gene:6657 SOX2
COSMIC (genes):SOX2 SOX2
CTD Gene:6657 SOX2
dbSNP Gene:6657 SOX2
ENSEMBL:ENSG00000181449 SOX2
ENSEMBL_homo_sapiens_GENE:ENSG00000181449.4 SOX2
HGNC:11195 SOX2
KEGG Gene (Homo sapiens):6657 SOX2
Monarch:6657 SOX2
NCBI Gene:6657 SOX2
OMIM:184429 SOX2
UCSC:P48431 SOX2
Reference Transcript
RefSeq:NM_003106.3 SOX2
Other Identifiers
11720991_s_at
11720992_a_at
11720993_at
16948461
213721_PM_at
213721_at
213722_PM_at
213722_at
228038_PM_at
228038_at
2654505
2654506
2654507
2654508
2654509
2654510
2654511
3114577
3114580
33108_i_at
33109_f_at
3502004
43431_at
57685_at
6657
8084165
89217_at
A_14_P103493
A_14_P132639
A_14_P202174
A_23_P401055
A_24_P379969
GE57573
GO:0000122
GO:0000785
GO:0000976
GO:0000978
GO:0000981
GO:0001228
GO:0001649
GO:0001654
GO:0001714
GO:0003677
GO:0003700
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005667
GO:0005694
GO:0005737
GO:0005829
GO:0006325
GO:0006351
GO:0006355
GO:0007155
GO:0009611
GO:0009653
GO:0010468
GO:0012501
GO:0016607
GO:0021781
GO:0021983
GO:0021984
GO:0022409
GO:0023052
GO:0030154
GO:0030900
GO:0035019
GO:0035198
GO:0042246
GO:0043226
GO:0043281
GO:0043410
GO:0043565
GO:0045597
GO:0045665
GO:0045893
GO:0045944
GO:0048839
GO:0048856
GO:0050680
GO:0070848
GO:0090090
GO:0090649
GO:0097150
GO:0140110
GO:1902807
GO:1904520
HMNXSV003037365
Hs.129911.0.A1_3p_at
Hs.816.0.A1_3p_at
Hs.816.0.A2_3p_at
ILMN_1770635
ILMN_2177156
PH_hs_0000096
TC03000969.hg
Z31560_s_at
Participates
as a component of
SOX2:MITF gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:DPPA4 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:ZIC3 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:EPHA1 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:FOXD3 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:SALL1 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:CDX2 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:DKK1 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:HHEX gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:TSC22D1 gene [nucleoplasm] (Homo sapiens)
SOX2:ZEB2 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:GSC gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:ZIC1 gene [nucleoplasm] (Homo sapiens)
TFAP2A:TFAP2C:POU5F1:SOX2:MYB:PAX7 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:FGF2 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:KLF4:PBX1:SMAD2:FOXP1-ES:NANOG gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:ZSCAN10:PRDM14:SMAD2:SALL4:FOXP1-ES:POU5F1 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:SOX2 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:TDGF1 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:STAT3 gene [nucleoplasm] (Homo sapiens)
MECP2:SOX2:MIR137 gene [nucleoplasm] (Homo sapiens)
POU5F1:SOX2:NANOG:EOMES gene [nucleoplasm] (Homo sapiens)
FOXH1:SMAD3:POU5F1:NANOG:SOX2:EOMES gene [nucleoplasm] (Homo sapiens)
as an input of
SOX2 binds the MITF promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind DPPA4 gene (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the ZIC3 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the EPHA1 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the FOXD3 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG Bind the SALL1 Promoter (Homo sapiens)
POU5F1 (OCT4), NANOG bind the CDX2 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the DKK1 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the HHEX promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the GSC promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the TSC22D1 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the EOMES promoter (Homo sapiens)
SOX2 binds the ZEB2 gene (Homo sapiens)
POU5F1 and SOX2 bind the ZIC1 gene (Homo sapiens)
TFAP2A:TFAP2C, POU5F1, SOX2 and MYB bind the PAX7 gene (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the FGF2 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG, KLF4, PBX1, SMAD2 bind the NANOG promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG, ZSCAN10, PRDM14, SMAD2, FOXP1-ES bind the POU5F1 (OCT4) promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the SOX2 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the TDGF1 promoter (Homo sapiens)
POU5F1 (OCT4), SOX2, NANOG bind the STAT3 promoter (Homo sapiens)
MECP2 and SOX2 bind MIR137 gene (Homo sapiens)
as an output of
Expression of SOX2 in anterior neural plate (Homo sapiens)
Expression of SOX2 in posterior neural plate (Homo sapiens)
p-2S-SMAD2,3:SMAD4, CTNNB1, and TBPL2 bind FOXH1:SMAD3:EOMES gene (Homo sapiens)
Expression of SOX2 (Homo sapiens)
as a member of
STAT3-upregulated nuclear proteins [nucleoplasm] (Homo sapiens)
SRY,SOX2,SOX3,SOX4,SOX6,SOX7,SOX9,SOX17 [nucleoplasm] (Homo sapiens)
This entity regulates
Positively
Expression of GBX2 in posterior neural plate
(Homo sapiens)
Inferred To
sox-4 [nucleoplasm]
(Caenorhabditis elegans)
Sox14 [nucleoplasm]
(Drosophila melanogaster)
SOX2 [nucleoplasm]
(Gallus gallus)
SoxN [nucleoplasm]
(Drosophila melanogaster)
sox2 [nucleoplasm]
(Danio rerio)
sox2 [nucleoplasm]
(Xenopus tropicalis)
D [nucleoplasm]
(Drosophila melanogaster)
sox-2 [nucleoplasm]
(Caenorhabditis elegans)
Sox2 [nucleoplasm]
(Mus musculus)
Sox2 [nucleoplasm]
(Rattus norvegicus)
Sox2 [nucleoplasm]
(Sus scrofa)
sox-3 [nucleoplasm]
(Caenorhabditis elegans)
Sox21b [nucleoplasm]
(Drosophila melanogaster)
sem-2 [nucleoplasm]
(Caenorhabditis elegans)
Sox21a [nucleoplasm]
(Drosophila melanogaster)
ROX1 [nucleoplasm]
(Saccharomyces cerevisiae)
mat1-Mc [nucleoplasm]
(Schizosaccharomyces pombe)
Homologues of SOX2 [nucleoplasm]
(Caenorhabditis elegans)
Homologues of SOX2 [nucleoplasm]
(Drosophila melanogaster)
Sox15 [nucleoplasm]
(Drosophila melanogaster)
Cross References
RefSeq
NP_003097.1
OpenTargets
ENSG00000181449
GeneCards
P48431
HPA
ENSG00000181449-SOX2
Ensembl
ENST00000325404
,
ENSP00000323588
,
ENSG00000181449
PRO
P48431
Pharos - Targets
P48431
Orphanet
15540
PDB
2LE4
,
6YOV
,
6T90
,
6WX9
,
1O4X
,
6WX7
,
6T7B
,
6WX8
Interactors (53)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P63165 SUMO1
11
lysyl-G97-SUMO1 [plasma membrane]
(R-HSA-9762382)
lysyl-G97-SUMO1 [nucleolus]
(R-HSA-9762385)
lysyl-G97-SUMO1 [viral capsid]
(R-HSA-9762386)
UBE2I-G97-SUMO1 [cytosol]
(R-HSA-4656941)
lysyl-G97-SUMO1 [endoplasmic reticulum-Golgi intermediate compartment membrane]
(R-HSA-9762380)
lysyl-G97-SUMO1 [cytosol]
(R-HSA-9762266)
UBE2I-G97-SUMO1 [nucleoplasm]
(R-HSA-3730622)
UBA2-G97-SUMO1 [nucleoplasm]
(R-HSA-3730616)
SUMO1 [nucleoplasm]
(R-HSA-877304)
SUMO1(2-101) [nucleoplasm]
(R-HSA-2990831)
lysyl-G97-SUMO1 [nucleoplasm]
(R-HSA-9761562)
0.666
4
UniProt:O14497 ARID1A
1
ARID1A [nucleoplasm]
(R-HSA-389259)
0.615
3
UniProt:Q99986 VRK1
2
VRK1 [nucleoplasm]
(R-HSA-2528998)
VRK1 [cytosol]
(R-HSA-2995381)
0.61
14
UniProt:Q01860 POU5F1 (OCT4)
1
POU5F1 [nucleoplasm]
(R-HSA-452472)
0.564
2
UniProt:O15550 KDM6A
1
KDM6A [nucleoplasm]
(R-HSA-4754224)
0.536
2
UniProt:P13010 XRCC5
4
XRCC5 [extracellular region]
(R-HSA-6806530)
XRCC5 [secretory granule lumen]
(R-HSA-6801297)
XRCC5 [cytosol]
(R-HSA-3134849)
XRCC5 [nucleoplasm]
(R-HSA-58274)
0.527
2
UniProt:O95865 DDAH2
0.527
2
UniProt:Q13177 PAK2
11
p-S141,T402-PAK2 [plasma membrane]
(R-HSA-5096524)
PAK2(1-524) [plasma membrane]
(R-HSA-164946)
p-Y130,S141,T402-PAK2 [cytosol]
(R-HSA-5218705)
K48polyUb-p-T402-PAK-2p43 [cytosol]
(R-HSA-3095873)
p-T402-PAK2(213-524) [nucleoplasm]
(R-HSA-211709)
p-T402-PAK2(213-524) [cytosol]
(R-HSA-211654)
p-5S-PAK2(2-212) [cytosol]
(R-HSA-211588)
p-S141,T402-PAK2 [cytosol]
(R-HSA-399824)
PAK2 [cytosol]
(R-HSA-211604)
p-5S-PAK2 [cytosol]
(R-HSA-211609)
PAK2(213-524) [cytosol]
(R-HSA-211653)
0.527
2
UniProt:Q96GK7 FAH2A
0.527
2
UniProt:O95416 SOX14
0.527
2
UniProt:P05455 SSB
1
SSB [nucleoplasm]
(R-HSA-58418)
0.527
2
UniProt:P30740 SERPINB1
2
SERPINB1 [extracellular region]
(R-HSA-6804818)
SERPINB1 [secretory granule lumen]
(R-HSA-6804786)
0.527
2
UniProt:Q8N163 CCAR2
2
DBC1 [nucleoplasm]
(R-HSA-3371479)
p-T454-DBC1 [nucleoplasm]
(R-HSA-3371569)
0.527
2
UniProt:Q9HCK1 ZDBF2
0.527
2
UniProt:Q9UBW7 ZMYM2
6
ZMYM2(1-913)-p-FGFR1(429-822) fusion [cytosol]
(R-HSA-1839016)
ZMYM2(1-913)-FGFR1(429-822) fusion [cytosol]
(R-HSA-1604544)
ZMYM2(1-1059)-p-4Y-FLT3(594-993) fusion [cytosol]
(R-HSA-9703309)
ZMYM2(1-1057)-p-5Y-FLT3(586-993) fusion [cytosol]
(R-HSA-9703319)
ZMYM2(1-1059)-FLT3(594-993) fusion [cytosol]
(R-HSA-9703310)
ZMYM2(1-1057)-FLT3(586-993) fusion [cytosol]
(R-HSA-9703311)
0.527
2
UniProt:O00151 PDLI1
0.527
2
UniProt:Q96FV2 SCRN2
0.527
2
UniProt:Q9Y651 SOX21
0.527
2
UniProt:O95983 MBD3
1
MBD3 [nucleoplasm]
(R-HSA-4657010)
0.499
3
UniProt:Q9P2D1 CHD7
0.483
2
UniProt:O75376 NCOR1
2
NCOR1 [cytosol]
(R-HSA-1253310)
NCOR1 [nucleoplasm]
(R-HSA-442501)
0.483
2
UniProt:Q9BYN8 MRPS26
1
MRPS26 [mitochondrial inner membrane]
(R-HSA-5368265)
0.483
2
UniProt:Q13610 PWP1
0.483
2
UniProt:Q8IVH2 FOXP4
0.483
2
UniProt:Q01167 FOXK2
1
FOXK2 [nucleoplasm]
(R-HSA-5689655)
0.483
2
UniProt:Q96JM2 ZN462
0.483
2
UniProt:O15014 ZN609
0.483
2
UniProt:Q86UP3 ZFHX4
0.483
2
UniProt:O15379 HDAC3
2
HDAC3 [nucleoplasm]
(R-HSA-442464)
Unfolded HDAC3 [cytosol]
(R-HSA-6813777)
0.483
2
UniProt:P51531 SMARCA2
1
SMARCA2 [nucleoplasm]
(R-HSA-389256)
0.483
2
UniProt:Q8N108 MIER1
0.483
2
UniProt:P82650 MRPS22
1
MRPS22 [mitochondrial inner membrane]
(R-HSA-5368259)
0.483
2
UniProt:Q99856 ARID3A
1
ARID3A [nucleoplasm]
(R-HSA-3782552)
0.483
2
UniProt:O15090 ZN536
0.483
2
UniProt:Q92785 DPF2
1
DPF2 [nucleoplasm]
(R-HSA-9727509)
0.483
2
UniProt:Q12824 SMARCB1
1
SMARCB1 [nucleoplasm]
(R-HSA-389261)
0.483
2
UniProt:Q9H0E3 SAP130
1
SAP130 [nucleoplasm]
(R-HSA-3006732)
0.483
2
UniProt:P82933 MRPS9
1
MRPS9 [mitochondrial inner membrane]
(R-HSA-5368194)
0.483
2
UniProt:Q9Y221 NIP7
1
NIP7 [nucleoplasm]
(R-HSA-6797236)
0.483
2
UniProt:Q9UQE7 SMC3
6
SMC3 [cytosol]
(R-HSA-2545223)
2xAcK-SMC3 [cytosol]
(R-HSA-2484792)
2xAcK-SMC3 [chromosome]
(R-HSA-2468146)
2xAcK-SMC3 [chromosome, centromeric region]
(R-HSA-2468148)
2xAcK-SMC3 [nucleoplasm]
(R-HSA-2468050)
SMC3 [nucleoplasm]
(R-HSA-163009)
0.483
2
UniProt:O76094 SRP72
1
SRP72 [cytosol]
(R-HSA-265069)
0.483
2
UniProt:Q9H582 ZN644
0.483
2
UniProt:Q96KQ7 EHMT2
1
EHMT2 [nucleoplasm]
(R-HSA-212151)
0.483
2
UniProt:Q8IVW6 ARI3B
0.483
2
UniProt:O75925 PIAS1
1
PIAS1 [nucleoplasm]
(R-HSA-877307)
0.483
2
UniProt:P51398 DAP3
1
DAP3 [mitochondrial inner membrane]
(R-HSA-5368174)
0.483
2
UniProt:Q8TAQ2 SMARCC2
1
SMARCC2 [nucleoplasm]
(R-HSA-389263)
0.483
2
UniProt:P39880 CUX1
2
CUX1(1-339)-FGFR1(429-822) fusion [cytosol]
(R-HSA-1614371)
CUX1(1-339)-p-FGFR1(429-822) fusion [cytosol]
(R-HSA-1838991)
0.483
2
UniProt:Q12948 FOXC1
1
FOXC1 [nucleoplasm]
(R-HSA-3927815)
0.483
2
UniProt:O00712 NFIB
1
NFIB [nucleoplasm]
(R-HSA-60136)
0.471
2
UniProt:P08651 NFIC
1
NFIC [nucleoplasm]
(R-HSA-60138)
0.471
2
UniProt:Q12857 NFIA
1
NFIA [nucleoplasm]
(R-HSA-60134)
0.471
2
UniProt:Q93009 USP7
2
USP7 [cytosol]
(R-HSA-8853511)
USP7 [nucleoplasm]
(R-HSA-3215278)
0.462
3
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