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Collagen alpha-1(V) chain C-term fragment [extracellular region]
Stable Identifier
R-HSA-2470075
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
extracellular region
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Homo sapiens)
Degradation of the extracellular matrix (Homo sapiens)
Collagen degradation (Homo sapiens)
Collagen type V degradation by MMP2,9,10 (Homo sapiens)
Cleaved collagen type V fibril [extracellular region] (Homo sapiens)
Cleaved tropocollagen type V [extracellular region] (Homo sapiens)
Cleaved tropocollagen alpha-1(V)X2 alpha-2(V) [extracellular region] (Homo sapiens)
Cleaved collagen alpha-1(V) chains [extracellular region] (Homo sapiens)
Collagen alpha-1(V) chain C-term fragment [extracellular region] (Homo sapiens)
Cleaved tropocollagen alpha-1-3(V) [extracellular region] (Homo sapiens)
Cleaved collagen alpha-1(V) chains [extracellular region] (Homo sapiens)
Collagen alpha-1(V) chain C-term fragment [extracellular region] (Homo sapiens)
External Reference Information
External Reference
UniProt:P20908 COL5A1
Gene Names
COL5A1
Chain
signal peptide:1-37, chain:38-1605, propeptide:1606-1838
Reference Genes
BioGPS Gene:1289 COL5A1
COSMIC (genes):COL5A1 COL5A1
CTD Gene:1289 COL5A1
dbSNP Gene:1289 COL5A1
ENSEMBL:ENSG00000130635 COL5A1
ENSEMBL_homo_sapiens_GENE:ENSG00000130635 COL5A1
HGNC:2209 COL5A1
KEGG Gene (Homo sapiens):1289 COL5A1
Monarch:1289 COL5A1
NCBI Gene:1289 COL5A1
OMIM:120215 COL5A1
UCSC:P20908 COL5A1
Reference Transcript
RefSeq:NM_000093.4 COL5A1
Other Identifiers
0000840050
11717272_at
11717273_at
11717274_s_at
11717275_s_at
1289
17090957
1A89
1A9A
203325_s_at
212488_at
212489_at
30769
3193484
3193485
3193497
3193498
3193505
3193506
3193519
3193520
3193523
3193524
3193525
3193527
3193528
3193533
3193534
3193535
3193536
3193538
3193539
3193541
3193542
3193543
3193546
3193547
3193548
3193549
3193550
3193552
3193553
3193558
3193559
3193561
3193563
3193564
3193567
3193568
3193569
3193570
3193572
3193581
3193582
3193584
3193585
3193586
3193587
3193589
3193590
3193591
3193592
3193593
3193594
3193597
3193599
3193600
3193601
3193602
3193605
3193606
3193607
3193608
3193610
3193611
3193613
3193615
3193616
3193619
3193624
3193625
3193626
3193627
3193628
3193629
3193630
8159142
A0A024R8E5
A_14_P116738
A_14_P118684
A_23_P158593
A_33_P3629678
AAA59993
AL591890
AL603650
AL645768
BAA14323
CCDS6982
CH471090
COL5A1
COL5A1-201
D90279
D90279_s_at
EAW88128
EAW88130
EAW88131
ENSG00000130635
ENSP00000360882
ENST00000371817
EntrezGene:1289
GE80890
GO:0001568
GO:0003007
GO:0003674
GO:0005178
GO:0005198
GO:0005201
GO:0005515
GO:0005575
GO:0005576
GO:0005581
GO:0005588
GO:0005604
GO:0005615
GO:0005622
GO:0005623
GO:0005737
GO:0005783
GO:0005788
GO:0006950
GO:0007009
GO:0007155
GO:0008150
GO:0008201
GO:0009058
GO:0009790
GO:0016477
GO:0030020
GO:0030154
GO:0030198
GO:0030199
GO:0031012
GO:0032964
GO:0032991
GO:0035313
GO:0035989
GO:0040011
GO:0043167
GO:0043226
GO:0043394
GO:0043588
GO:0045112
GO:0046872
GO:0048407
GO:0048592
GO:0048646
GO:0048856
GO:0048870
GO:0051128
GO:0061024
GO:0062023
GO:0097435
GO:1903225
HGNC:2209
HPA030769
Hs.146428.0.S2_3p_a_at
Hs.146428.2.A1_3p_at
Hs.146428.2.A2_3p_at
ILMN_1706505
IPR000885
IPR001791
IPR008160
IPR013320
LRG_737
M76729
MIM:120215
MIM:130000
NM_000093
NP_000084
PF01391
PF01410
PH_hs_0025290
SM00038
SM00210
SM00282
TC09000787.hg
uc004cfe.5
UPI0000210EE3
Participant Of
hasMember
Cleaved collagen alpha-1(V) chains [extracellular region]
Other forms of this molecule
3x4Hyp-GalHyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
GalHyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
GlcGalHyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
5Hyl-COL5A1(38-1838) [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL5A1(38-1838) [extracellular region]
COL5A1(38-1838) [extracellular region]
3x4Hyp-5Hyl-COL5A1(38-1838) [extracellular region]
3x4Hyp-GalHyl-COL5A1(38-1838) [extracellular region]
3x4Hyp-3Hyp-COL5A1(38-1838) [extracellular region]
GalHyl-COL5A1(38-1838) [extracellular region]
5Hyl-COL5A1(38-1838) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL5A1(38-1838) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL5A1(38-1838) [extracellular region]
GlcGalHyl-COL5A1(38-1838) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL5A1(38-1838) [extracellular region]
3x4Hyp-COL5A1(38-1838) [extracellular region]
GalHyl-COL5A1(?-1838) [extracellular region]
3x4Hyp-GlcGalHyl-COL5A1(?-1838) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL5A1(?-1838) [extracellular region]
GlcGalHyl-COL5A1(?-1838) [extracellular region]
3x4Hyp-5Hyl-COL5A1(?-1838) [extracellular region]
3x4Hyp-COL5A1(?-1838) [extracellular region]
3x4Hyp-3Hyp-COL5A1(?-1838) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL5A1(?-1838) [extracellular region]
5Hyl-COL5A1(?-1838) [extracellular region]
3x4Hyp-GalHyl-COL5A1(?-1838) [extracellular region]
COL5A1(?-1838) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL5A1(?-1838) [extracellular region]
COL5A1(?-?) [extracellular region]
3,4-Hyp 5-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL5A1(?-?) [extracellular region]
5-Gal-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
4-Hyp 5-Gal-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
Glu-Gal-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
3,4-hydroxyprolyl collagen alpha-1(V) chain C-term fragment [extracellular region]
3,4-Hyp 5-Gal-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
3x4Hyp-COL5A1(?-?) [extracellular region]
3x4Hyp-5Hyl-COL5A1(?-?) [extracellular region]
GalHyl-COL5A1(?-?) [extracellular region]
4-Hyp 5-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
5-hydroxylysyl collagen alpha-1(V) chain C-term fragment [extracellular region]
Glu-Gal-Hyl collagen alpha-1(V) chain [extracellular region]
4-Hyp 5-Hyl collagen alpha-1(V) chain [extracellular region]
4-Hyp Glu-Gal-Hyl collagen alpha-1(V) chain [extracellular region]
3,4-Hyp 5-Hyl collagen alpha-1(V) chain [extracellular region]
3,4-Hyp Glu-Gal-Hyl collagen alpha-1(V) chain [extracellular region]
3,4-hydroxyprolyl collagen alpha-1(V) chain [extracellular region]
4-hydroxyprolyl collagen alpha-1(V) chain [extracellular region]
5-Gal-Hyl collagen alpha-1(V) chain [extracellular region]
4-Hyp 5-Gal-Hyl collagen alpha-1(V) chain [extracellular region]
Collagen alpha-1(V) chain [extracellular region]
5-hydroxylysyl collagen alpha-1(V) chain [extracellular region]
3,4-Hyp 5-Gal-Hyl collagen alpha-1(V) chain [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL5A1(?-?) [extracellular region]
4-Hyp Glu-Gal-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
4-hydroxyprolyl collagen alpha-1(V) chain C-term fragment [extracellular region]
3x4Hyp-3Hyp-COL5A1(?-?) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL5A1(?-?) [extracellular region]
3x4Hyp-GlcGalHyl-COL5A1(?-?) [extracellular region]
3,4-Hyp Glu-Gal-Hyl collagen alpha-1(V) chain C-term fragment [extracellular region]
GlcGalHyl-COL5A1(?-?) [extracellular region]
5Hyl-COL5A1(?-?) [extracellular region]
3x4Hyp-GalHyl-COL5A1(?-?) [extracellular region]
Inferred To
Collagen alpha-1(V) chain [extracellular region] (Bos taurus)
Collagen alpha-1(V) chain [extracellular region] (Canis familiaris)
Collagen alpha-1(V) chain [extracellular region] (Danio rerio)
Collagen alpha-1(V) chain [extracellular region] (Mus musculus)
Collagen alpha-1(V) chain [extracellular region] (Rattus norvegicus)
Collagen alpha-1(V) chain [extracellular region] (Sus scrofa)
Collagen alpha-1(V) chain [extracellular region] (Xenopus tropicalis)
Homologues of Collagen alpha-1(V) chain [extracellular region] (Canis familiaris)
Homologues of Collagen alpha-1(V) chain [extracellular region] (Danio rerio)
Homologues of Collagen alpha-1(V) chain [extracellular region] (Rattus norvegicus)
Cross References
RefSeq
NP_000084.3
OpenTargets
ENSG00000130635
GeneCards
P20908
PRO
P20908
Orphanet
15776
PDB
1A9A
,
1A89
Interactors (4)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P08253 MMP2
5
MMP2(30-660) [extracellular region]
(R-HSA-1604364)
MMP2(30-66) [extracellular region]
(R-HSA-1604347)
MMP2(67-109) [extracellular region]
(R-HSA-1604371)
MMP2(67-660) [extracellular region]
(R-HSA-1604345)
MMP2(110-660) [extracellular region]
(R-HSA-381456)
0.508
2
UniProt:P24821 TNC
3
TNC [endoplasmic reticulum lumen]
(R-HSA-8956722)
p-TNC [endoplasmic reticulum lumen]
(R-HSA-8956912)
TNC [extracellular region]
(R-HSA-215968)
0.508
2
UniProt:P01033 TIMP1
4
TIMP1 [extracellular region]
(R-HSA-349743)
TIMP1 [platelet alpha granule lumen]
(R-HSA-349745)
p-TIMP1 [endoplasmic reticulum lumen]
(R-HSA-8957082)
TIMP1 [endoplasmic reticulum lumen]
(R-HSA-8956691)
0.508
2
UniProt:P02751 FN1
8
FN1(32-271) [extracellular region]
(R-HSA-3787935)
FN1(32-2386) [platelet alpha granule lumen]
(R-HSA-114620)
FN1(272-2386) [extracellular region]
(R-HSA-3788024)
FN1(32-?) [extracellular region]
(R-HSA-2533850)
FN1(?-2386) [extracellular region]
(R-HSA-2533841)
p-FN1 [endoplasmic reticulum lumen]
(R-HSA-8956937)
FN1 [endoplasmic reticulum lumen]
(R-HSA-8956708)
FN1(32-2386) [extracellular region]
(R-HSA-54851)
0.508
2
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