10xdHF-10xglutamyl semialdehyde (Pro)-6xL-tyrosine residue-3xOxoH-2xmodified L-lysine residue-N'-formyl-L-kynurenine-APOB(28-4563) [endocytic vesicle lumen]

Stable Identifier
R-HSA-2239461
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
Synonyms
10xdHF-10xglutamyl semialdehyde (Pro)-6xL-tyrosine residue-3xOxoH-2xmodified L-lysine residue-N'-formyl-L-kynurenine-APOB, oxidized apoB-100, oxidized apolipoprotein B-100
Locations in the PathwayBrowser
Literature References
PubMed ID Title Journal Year
20470747 Mapping oxidations of apolipoprotein B-100 in human low-density lipoprotein by liquid chromatography-tandem mass spectrometry

Tarr, MA, Chakraborty, S, Cai, Y

Anal Biochem 2010
External Reference Information
External Reference
Gene Names
APOB
Chain
signal peptide:1-27, chain:28-4563, chain:28-2179
Reference Transcript
Other Identifiers
11724530_a_at
11749631_a_at
11758033_s_at
16895014
205108_PM_s_at
205108_s_at
223579_PM_s_at
223579_s_at
2543164
2543165
2543166
2543167
2543168
2543169
2543170
2543171
2543172
2543173
2543174
2543175
2543176
2543177
2543178
2543179
2543180
2543181
2543182
2543183
2543184
2543185
2543186
2543189
2543190
2543193
2543194
2543195
2543196
2543197
2543198
2543199
2543200
2543201
2543202
2543203
2543204
2543205
2543207
2543208
2543212
2543215
2543216
2543217
261_s_at
338
35332_at
8050619
A_23_P79591
GE59661
GO:0001701
GO:0005215
GO:0005319
GO:0005515
GO:0005543
GO:0005576
GO:0005615
GO:0005737
GO:0005764
GO:0005768
GO:0005769
GO:0005773
GO:0005783
GO:0005788
GO:0005789
GO:0005790
GO:0005811
GO:0005829
GO:0005886
GO:0006629
GO:0006642
GO:0006869
GO:0007018
GO:0007283
GO:0007399
GO:0008201
GO:0008202
GO:0008203
GO:0008289
GO:0009566
GO:0009615
GO:0009791
GO:0010008
GO:0010628
GO:0010744
GO:0010884
GO:0010886
GO:0016042
GO:0019433
GO:0022414
GO:0030154
GO:0030163
GO:0030301
GO:0030317
GO:0030669
GO:0031410
GO:0031904
GO:0033344
GO:0034359
GO:0034360
GO:0034361
GO:0034362
GO:0034363
GO:0034374
GO:0034379
GO:0034383
GO:0035473
GO:0042157
GO:0042158
GO:0042159
GO:0042627
GO:0042632
GO:0042953
GO:0043025
GO:0043202
GO:0043226
GO:0043231
GO:0045540
GO:0048844
GO:0048856
GO:0048870
GO:0050750
GO:0051649
GO:0061024
GO:0065003
GO:0070062
GO:0070971
GO:0071682
GO:0120009
GO:0120020
HMNXSV003046817
ILMN_1664024
M19828_s_at
PH_hs_0023426
TC02001628.hg
TC02004093.hg
TC02004094.hg
TC02004095.hg
g4502152_3p_a_at
g7770246_3p_s_at
Participates
Other forms of this molecule
Inferred To
Modified Residues
Name
L-tyrosine residue at 2665
Coordinate
2665
PsiMod Name
PsiMod Definition
A protein modification that effectively converts a source amino acid residue to L-tyrosine.
Name
L-tyrosine residue at 2845
Coordinate
2845
PsiMod Name
PsiMod Definition
A protein modification that effectively converts a source amino acid residue to L-tyrosine.
Name
L-tyrosine residue at 4019
Coordinate
4019
PsiMod Name
PsiMod Definition
A protein modification that effectively converts a source amino acid residue to L-tyrosine.
Name
L-tyrosine residue at 4531
Coordinate
4531
PsiMod Name
PsiMod Definition
A protein modification that effectively converts a source amino acid residue to L-tyrosine.
Name
L-tyrosine residue at 680
Coordinate
680
PsiMod Name
PsiMod Definition
A protein modification that effectively converts a source amino acid residue to L-tyrosine.
Name
L-tyrosine residue at 883
Coordinate
883
PsiMod Name
PsiMod Definition
A protein modification that effectively converts a source amino acid residue to L-tyrosine.
Name
N'-formyl-L-kynurenine at 583
Coordinate
583
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-tryptophan residue to N'-formyl-L-kynurenine.
Name
Oxohistidine (from histidine) at 2507
Coordinate
2507
PsiMod Name
PsiMod Definition
modification from DeltaMass
Name
Oxohistidine (from histidine) at 4529
Coordinate
4529
PsiMod Name
PsiMod Definition
modification from DeltaMass
Name
Oxohistidine (from histidine) at 596
Coordinate
596
PsiMod Name
PsiMod Definition
modification from DeltaMass
Name
dihydroxyphenylalanine (Phe) at 1020
Coordinate
1020
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 144
Coordinate
144
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 276
Coordinate
276
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 3295
Coordinate
3295
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 3923
Coordinate
3923
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 3926
Coordinate
3926
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 4380
Coordinate
4380
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 4380
Coordinate
4380
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 4451
Coordinate
4451
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
dihydroxyphenylalanine (Phe) at 56
Coordinate
56
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-phenylalanine residue to a dihydroxyphenylalanine.
Name
glutamyl semialdehyde (Pro) at 1007
Coordinate
1007
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 145
Coordinate
145
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 2620
Coordinate
2620
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 2659
Coordinate
2659
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 3262
Coordinate
3262
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 3293
Coordinate
3293
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 3310
Coordinate
3310
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 3593
Coordinate
3593
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 65
Coordinate
65
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
glutamyl semialdehyde (Pro) at 663
Coordinate
663
PsiMod Name
PsiMod Definition
A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.
Name
modified L-lysine residue at 2195
Coordinate
2195
PsiMod Name
PsiMod Definition
A protein modification that modifies an L-lysine residue.
Name
modified L-lysine residue at 2208
Coordinate
2208
PsiMod Name
PsiMod Definition
A protein modification that modifies an L-lysine residue.
Cross References
RefSeq
OpenTargets
GeneCards
ZINC - Substances
ZINC target
PRO
Pharos - Targets
Orphanet
ZINC - Predictions - Purchasable
HMDB Protein
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