C4S-VCAN [extracellular region]

Stable Identifier
R-HSA-2064142
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
extracellular region
Synonyms
_VCAN, Versican core protein, CSPG2_HUMAN, VCAN
Locations in the PathwayBrowser
Expand all
External Reference Information
External Reference
UniProt:P13611 VCAN
Gene Names
VCAN, CSPG2
Chain
signal peptide:1-20, chain:21-3396
Reference Genes
BioGPS Gene:1462 VCAN
COSMIC (genes):VCAN VCAN
CTD Gene:1462 VCAN
dbSNP Gene:1462 VCAN
ENSEMBL:ENSG00000038427 VCAN
HGNC:2464 VCAN
KEGG Gene (Homo sapiens):1462 VCAN
Monarch:1462 VCAN
NCBI Gene:1462 VCAN
OMIM:118661 VCAN
UCSC:P13611 VCAN
Reference Transcript
Other Identifiers
0005670484
11742207_a_at
11742208_a_at
11748164_a_at
11748311_s_at
11755009_s_at
11757783_s_at
11759402_s_at
11759403_x_at
1462
16986913
204619_s_at
204620_s_at
211571_s_at
215646_s_at
221731_x_at
2818523
2818524
2818525
2818529
2818532
2818533
2818534
2818535
2818536
2818543
2818549
2818550
2818559
2818560
2818561
2818562
2818563
2818564
2818565
2818568
2818571
2818572
2818573
2818577
2818578
2818581
2818582
2818583
2818584
2818585
2818586
31682_s_at
38111_at
38112_g_at
45718_at
4726
8106743
8979
A0A024RAL1
A0A024RAP3
A0A024RAQ9
A_14_P114502
A_14_P117380
A_14_P132108
A_23_P144959
AAA36437
AAA65018
AAA67565
AAB24878
AAD48545
AF084545
BAA06801
CAA34128
CAB008979
CCDS4060
CCDS47242
CCDS54875
CCDS54876
CH471084
CSPG2
D32039
D6RGZ6
E9PF17
EAW95904
EAW95905
EAW95906
EAW95907
EAW95909
EAW95910
ENSG00000038427
ENSP00000265077
ENSP00000340062
ENSP00000342768
ENSP00000421362
ENST00000265077
ENST00000265077.7
ENST00000342785
ENST00000342785.8
ENST00000343200
ENST00000343200.9
ENST00000502527
ENST00000502527.2
EntrezGene:1462
EntrezGene:VCAN
g1008912_3p_a_at
g1008912_3p_s_at
GE61173
GO:0001501
GO:0001649
GO:0003674
GO:0005198
GO:0005509
GO:0005515
GO:0005539
GO:0005540
GO:0005575
GO:0005576
GO:0005615
GO:0005622
GO:0005623
GO:0005737
GO:0005764
GO:0005773
GO:0005783
GO:0005788
GO:0005794
GO:0005796
GO:0006464
GO:0006790
GO:0007155
GO:0007275
GO:0007417
GO:0008037
GO:0008150
GO:0009056
GO:0009058
GO:0016020
GO:0030021
GO:0030154
GO:0030198
GO:0030206
GO:0030207
GO:0030208
GO:0030246
GO:0031012
GO:0043167
GO:0043202
GO:0043226
GO:0043687
GO:0044267
GO:0044281
GO:0048856
GO:0062023
HGNC:2464
HPA004726
Hs.81800.0.S2_3p_a_at
Hs.81800.4.A1_3p_a_at
ILMN_1687301
ILMN_1892828
IPR000152
IPR000436
IPR000538
IPR000742
IPR001304
IPR001881
IPR003599
IPR007110
IPR013032
IPR013106
IPR013783
IPR016186
IPR016187
IPR018097
IPR018378
IPR033987
IPR035976
IPR036179
J02814
MIM:118661
MIM:143200
NM_001126336
NM_001164097
NM_001164098
NM_004385
NP_001119808
NP_001157569
NP_001157570
NP_004376
PF00008
PF00059
PF00084
PF00193
PF07686
PH_hs_0020300
PR00010
PR01265
Q86W61
S52488
SM00032
SM00034
SM00179
SM00181
SM00409
SM00445
TC05000412.hg
U16306
U16306_at
U26555
UPI000002B0EA
UPI000002B0EB
UPI000002B0EC
UPI000013178B
VCAN
VCAN-201
VCAN-202
VCAN-203
VCAN-204
X15998
Participant Of
hasMember
Other forms of this molecule
p-VCAN [endoplasmic reticulum lumen]
VCAN [endoplasmic reticulum lumen]
dermatan-VCAN [Golgi lumen]
D2,4(S)2-VCAN [Golgi lumen]
D2,4,4(S)3-VCAN [Golgi lumen]
D4S-VCAN [Golgi lumen]
chondroitin(1)-VCAN [Golgi lumen]
chondroitin(2)-VCAN [Golgi lumen]
chondroitin(3)-VCAN [Golgi lumen]
C4S-VCAN [Golgi lumen]
CSE-VCAN [Golgi lumen]
C6S-VCAN [Golgi lumen]
CSE-VCAN [lysosomal lumen]
C6S-VCAN [lysosomal lumen]
C4S-VCAN [lysosomal lumen]
D2,4(S)2-VCAN [lysosomal lumen]
D4S-VCAN [lysosomal lumen]
Gal-Gal-Xyl-VCAN [Golgi lumen]
GlcA-Gal-Gal-Xyl-VCAN [Golgi lumen]
Gal-Xyl-VCAN [Golgi lumen]
XylS-VCAN [Golgi lumen]
VCAN [Golgi lumen]
D2,4,4(S)3-VCAN [lysosomal lumen]
VCAN [lysosomal lumen]
C6S-VCAN [extracellular region]
CSE-VCAN [extracellular region]
D2,4,4(S)3-VCAN [extracellular region]
D2,4(S)2-VCAN [extracellular region]
D4S-VCAN [extracellular region]
Inferred To
C4S-VCAN [extracellular region] (Canis familiaris)
C4S-VCAN [extracellular region] (Danio rerio)
C4S-VCAN [extracellular region] (Gallus gallus)
C4S-VCAN [extracellular region] (Mus musculus)
C4S-VCAN [extracellular region] (Rattus norvegicus)
C4S-VCAN [extracellular region] (Sus scrofa)
C4S-VCAN [extracellular region] (Xenopus tropicalis)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63513) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
OpenTargets
GeneCards
PRO
Orphanet
HMDB Protein
Interactors (1)