C4S-VCAN [extracellular region]

Stable Identifier
R-HSA-2064142
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
extracellular region
Synonyms
_VCAN, Versican core protein, CSPG2_HUMAN, VCAN
Locations in the PathwayBrowser
Expand all
External Reference Information
External Reference
UniProt:P13611 VCAN
Gene Names
VCAN, CSPG2
Chain
signal peptide:1-20, chain:21-3396
Reference Genes
BioGPS Gene:1462 VCAN
COSMIC (genes):VCAN VCAN
CTD Gene:1462 VCAN
dbSNP Gene:1462 VCAN
ENSEMBL:ENSG00000038427 VCAN
HGNC:2464 VCAN
KEGG Gene (Homo sapiens):1462 VCAN
Monarch:1462 VCAN
NCBI Gene:1462 VCAN
OMIM:118661 VCAN
UCSC:P13611 VCAN
Reference Transcript
Other Identifiers
0005670484
11742207_a_at
11742208_a_at
11748164_a_at
11748311_s_at
11755009_s_at
11757783_s_at
11759402_s_at
11759403_x_at
1462
16986913
204619_s_at
204620_s_at
211571_s_at
215646_s_at
221731_x_at
2818523
2818524
2818525
2818529
2818532
2818533
2818534
2818535
2818536
2818543
2818549
2818550
2818559
2818560
2818561
2818562
2818563
2818564
2818565
2818568
2818571
2818572
2818573
2818577
2818578
2818581
2818582
2818583
2818584
2818585
2818586
31682_s_at
38111_at
38112_g_at
45718_at
8106743
A_14_P114502
A_14_P117380
A_14_P132108
A_23_P144959
GE61173
GO:0001501
GO:0001649
GO:0001750
GO:0003674
GO:0005198
GO:0005509
GO:0005515
GO:0005539
GO:0005540
GO:0005575
GO:0005576
GO:0005615
GO:0005622
GO:0005737
GO:0005764
GO:0005773
GO:0005783
GO:0005788
GO:0005794
GO:0005796
GO:0005929
GO:0006464
GO:0006790
GO:0007155
GO:0007275
GO:0007417
GO:0008037
GO:0008150
GO:0008347
GO:0009056
GO:0009058
GO:0016020
GO:0030021
GO:0030154
GO:0030198
GO:0030206
GO:0030207
GO:0030208
GO:0030246
GO:0031012
GO:0033165
GO:0040011
GO:0042995
GO:0043167
GO:0043202
GO:0043226
GO:0043687
GO:0044267
GO:0044281
GO:0048856
GO:0048870
GO:0062023
HMNXSV003046712
Hs.81800.0.S2_3p_a_at
Hs.81800.4.A1_3p_a_at
ILMN_1687301
ILMN_1892828
PH_hs_0020300
TC05000412.hg
U16306_at
g1008912_3p_a_at
g1008912_3p_s_at
Participates
as a member of
Other forms of this molecule
dermatan-VCAN [Golgi lumen]
D2,4(S)2-VCAN [Golgi lumen]
D2,4,4(S)3-VCAN [Golgi lumen]
D4S-VCAN [Golgi lumen]
CSE-VCAN [lysosomal lumen]
C6S-VCAN [lysosomal lumen]
C4S-VCAN [lysosomal lumen]
D2,4(S)2-VCAN [lysosomal lumen]
D4S-VCAN [lysosomal lumen]
D4S-VCAN [extracellular region]
D2,4(S)2-VCAN [extracellular region]
D2,4,4(S)3-VCAN [extracellular region]
VCAN [lysosomal lumen]
D2,4,4(S)3-VCAN [lysosomal lumen]
CSE-VCAN [extracellular region]
C6S-VCAN [extracellular region]
CSE-VCAN [Golgi lumen]
C6S-VCAN [Golgi lumen]
C4S-VCAN [Golgi lumen]
chondroitin(3)-VCAN [Golgi lumen]
chondroitin(2)-VCAN [Golgi lumen]
chondroitin(1)-VCAN [Golgi lumen]
GlcA-Gal-Gal-Xyl-VCAN [Golgi lumen]
VCAN [endoplasmic reticulum lumen]
p-VCAN [endoplasmic reticulum lumen]
VCAN [Golgi lumen]
XylS-VCAN [Golgi lumen]
Gal-Xyl-VCAN [Golgi lumen]
Gal-Gal-Xyl-VCAN [Golgi lumen]
Inferred To
C4S-VCAN [extracellular region] (Canis familiaris)
C4S-VCAN [extracellular region] (Gallus gallus)
C4S-VCAN [extracellular region] (Xenopus tropicalis)
Vcan [extracellular region] (Mus musculus)
Vcan [extracellular region] (Rattus norvegicus)
N [extracellular region] (Drosophila melanogaster)
vcana [extracellular region] (Danio rerio)
VCAN [extracellular region] (Sus scrofa)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63513) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
OpenTargets
HPA
GeneCards
Ensembl
PRO
Pharos - Targets
GlyGen
Orphanet
HMDB Protein
Interactors (1)
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