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GalHyl-COL6A6 [endoplasmic reticulum lumen]
Stable Identifier
R-HSA-2023544
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
endoplasmic reticulum lumen
Synonyms
5-Gal-Hyl-collagen alpha-6(VI) propeptide, CO6A6_HUMAN, COL6A6
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Homo sapiens)
Collagen formation (Homo sapiens)
Collagen biosynthesis and modifying enzymes (Homo sapiens)
COLGALT1,COLGALT2:Galactosyl-hydroxylysyl collagen propeptides dissociates (Homo sapiens)
COLGALT1,COLGALT2:Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Collagen chain trimerization (Homo sapiens)
Association of procollagen type VI (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
C-linked procollagen type VI trimer [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Dimerization of procollagen type VI (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI dimer [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Galactosylation of collagen propeptide hydroxylysines by PLOD3 (Homo sapiens)
PLOD3:Fe2+ dimer:Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Galactosylation of collagen propeptide hydroxylysines by procollagen galactosyltransferases 1, 2. (Homo sapiens)
COLGALT1,COLGALT2:Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Glucosylation of collagen propeptide hydroxylysines (Homo sapiens)
PLOD3:Fe2+ dimer:Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
PLOD3:Fe2+ dimer:Galactosyl-hydroxylysyl collagen propeptides dissociates (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
PLOD3:Fe2+ dimer:Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Homo sapiens)
Galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Procollagen triple helix formation (Homo sapiens)
Collagen and procollagen triple helices:Serpin H1 [endoplasmic reticulum lumen] (Homo sapiens)
Collagen and procollagen triple helices [endoplasmic reticulum lumen] (Homo sapiens)
Non-fibrillar collagens [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Procollagen C-linked trimers [endoplasmic reticulum lumen] (Homo sapiens)
C-linked procollagen type VI trimer [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Secretion of collagens (Homo sapiens)
Collagens and tropocollagens:Serpin H1 [endoplasmic reticulum lumen] (Homo sapiens)
Collagens and tropocollagens [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI tetramer [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI dimer [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Non-fibrillar collagens [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Tetramerization of procollagen VI (Homo sapiens)
Collagen type VI dimer [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI tetramer [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI dimer [endoplasmic reticulum lumen] (Homo sapiens)
Collagen type VI [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-3-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
Alpha-6(VI) propeptides [endoplasmic reticulum lumen] (Homo sapiens)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Homo sapiens)
External Reference Information
External Reference
UniProt:A6NMZ7 COL6A6
Gene Names
COL6A6
Chain
signal peptide:1-19, chain:20-2263
Reference Genes
BioGPS Gene:131873 COL6A6
COSMIC (genes):COL6A6 COL6A6
CTD Gene:131873 COL6A6
dbSNP Gene:131873 COL6A6
ENSEMBL:ENSG00000206384 COL6A6
HGNC:27023 COL6A6
KEGG Gene (Homo sapiens):131873 COL6A6
Monarch:131873 COL6A6
NCBI Gene:131873 COL6A6
OMIM:616613 COL6A6
UCSC:A6NMZ7 COL6A6
Reference Transcript
RefSeq:XM_017005711.1 COL6A6
RefSeq:XM_017005714.1 COL6A6
RefSeq:XM_005247121.4 COL6A6
RefSeq:XM_011512426.2 COL6A6
RefSeq:XM_017005712.1 COL6A6
RefSeq:XM_017005713.1 COL6A6
RefSeq:XM_011512425.2 COL6A6
RefSeq:XM_017005715.1 COL6A6
RefSeq:NM_001102608.1 COL6A6
RefSeq:XM_011512428.2 COL6A6
Other Identifiers
11756896_a_at
131873
16945543
230867_at
242641_at
2642188
2642191
2642192
2642193
2642195
2642196
2642197
2642198
2642201
2642202
2642203
2642206
2642207
2642208
2642209
2642211
2642213
2642214
2642215
2642216
2642217
2642221
2642223
2642226
2642227
2642229
2642232
2642233
2642234
2642235
2642236
2642242
2642243
2642244
2642246
2642248
2642252
2642253
2642258
2642259
2642260
2642291
2642293
63451_at
8082597
88669_at
A_14_P129368
A_32_P224525
GE574205
GO:0003674
GO:0005198
GO:0005575
GO:0005576
GO:0005581
GO:0007155
GO:0008150
GO:0030020
GO:0031012
GO:0032991
GO:0062023
Hs.120388.0.A1_3p_at
Hs.263560.1.A1_3p_at
ILMN_1815679
ILMN_3237932
PH_hs_0023311
TC03000705.hg
TC03002545.hg
Participant Of
hasCandidate
5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen]
hasMember
Alpha-6(VI) propeptides [endoplasmic reticulum lumen]
Other forms of this molecule
3Hyp-4Hyp-GalHyl-COL6A6 [endoplasmic reticulum lumen]
GlcGalHyl-COL6A6 [endoplasmic reticulum lumen]
4Hyp-GalHyl-COL6A6 [endoplasmic reticulum lumen]
4Hyp-GlcGalHyl-COL6A6 [endoplasmic reticulum lumen]
3Hyp-4Hyp-GlcGalHyl-COL6A6 [endoplasmic reticulum lumen]
COL6A6 [endoplasmic reticulum lumen]
4Hyp-COL6A6 [endoplasmic reticulum lumen]
3Hyp-4Hyp-COL6A6 [endoplasmic reticulum lumen]
4Hyp-5Hyl-COL6A6 [endoplasmic reticulum lumen]
3Hyp-4Hyp-5Hyl-COL6A6 [endoplasmic reticulum lumen]
5Hyl-COL6A6 [endoplasmic reticulum lumen]
3Hyp-4Hyp-COL6A6(?-2263) [extracellular region]
GlcGalHyl-COL6A6(20-?) [extracellular region]
GalHyl-COL6A6(?-2263) [extracellular region]
4Hyp-5Hyl-COL6A6(20-?) [extracellular region]
COL6A6(?-2263) [extracellular region]
5Hyl-COL6A6(20-?) [extracellular region]
3Hyp-4Hyp-GalHyl-COL6A6(20-?) [extracellular region]
3Hyp-4Hyp-5Hyl-COL6A6 [extracellular region]
4Hyp-GalHyl-COL6A6(20-?) [extracellular region]
4Hyp-GlcGalHyl-COL6A6(?-2263) [extracellular region]
5Hyl-COL6A6(?-2263) [extracellular region]
GlcGalHyl-COL6A6(?-2263) [extracellular region]
COL6A6(20-?) [extracellular region]
GalHyl-COL6A6(20-?) [extracellular region]
4Hyp-GalHyl-COL6A6(?-2263) [extracellular region]
3Hyp-4Hyp-GalHyl-COL6A6(?-2263) [extracellular region]
3Hyp-4Hyp-COL6A6 [extracellular region]
4Hyp-COL6A6(20-?) [extracellular region]
4Hyp-COL6A6(?-2263) [extracellular region]
3Hyp-4Hyp-GlcGalHyl-COL6A6(?-2263) [extracellular region]
3Hyp-4Hyp-5Hyl-COL6A6(?-2263) [extracellular region]
4Hyp-5Hyl-COL6A6(?-2263) [extracellular region]
4Hyp-GlcGalHyl-COL6A6(20-?) [extracellular region]
3Hyp-4Hyp-GlcGalHyl-COL6A6(20-?) [extracellular region]
GalHyl-COL6A6 [extracellular region]
3Hyp-4Hyp-GalHyl-COL6A6 [extracellular region]
3Hyp-4Hyp-COL6A6 [extracellular region]
4Hyp-COL6A6 [extracellular region]
4Hyp-GlcGalHyl-COL6A6 [extracellular region]
GlcGalHyl-COL6A6 [extracellular region]
3Hyp-4Hyp-GlcGalHyl-COL6A6 [extracellular region]
3Hyp-4Hyp-5Hyl-COL6A6 [extracellular region]
4Hyp-5Hyl-COL6A6 [extracellular region]
COL6A6 [extracellular region]
4Hyp-GalHyl-COL6A6 [extracellular region]
5Hyl-COL6A6 [extracellular region]
Inferred To
col6a4a [endoplasmic reticulum lumen] (Danio rerio)
Col6a6 [endoplasmic reticulum lumen] (Mus musculus)
Col6a6 [endoplasmic reticulum lumen] (Rattus norvegicus)
Homologues of GalHyl-COL6A6 [endoplasmic reticulum lumen] (Danio rerio)
GalHyl-COL6A6 [endoplasmic reticulum lumen] (Danio rerio)
Modified Residues
Name
O5-galactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-galactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.
Cross References
RefSeq
XP_011510730.1
,
XP_016861204.1
,
XP_005247178.1
,
XP_016861200.1
,
XP_011510728.1
,
XP_016861202.1
,
NP_001096078.1
,
XP_016861203.1
,
XP_016861201.1
,
XP_011510727.1
OpenTargets
ENSG00000206384
GeneCards
A6NMZ7
HPA
ENSG00000206384-COL6A6
Ensembl
ENST00000358511
,
ENSP00000351310
,
ENSG00000206384
PRO
A6NMZ7
Orphanet
24428
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