Reactome | ZNF550 [nucleoplasm]

ZNF550 [nucleoplasm]

Stable Identifier

R-HSA-1973896

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

nucleoplasm

Synonyms

Zinc finger protein 550, ZN550_HUMAN

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q7Z398 ZNF550

Gene Names

ZNF550

Chain

chain:1-422

Reference Genes

BioGPS Gene:162972 ZNF550

COSMIC (genes):ZNF550 ZNF550

CTD Gene:162972 ZNF550

dbSNP Gene:162972 ZNF550

ENSEMBL:ENSG00000251369 ZNF550

HGNC:28643 ZNF550

KEGG:hsa:162972 ZNF550

Monarch:162972 ZNF550

NCBI Gene:162972 ZNF550

UCSC:Q7Z398 ZNF550

Reference Transcript

Other Identifiers

11756990_a_at

162972

16875970

215124_PM_at

215124_at

228099_PM_at

228099_at

3872311

3872312

3872313

3872314

3872315

3872316

3872317

3872318

3872319

3872320

3872321

3872322

3872326

3872327

55909_at

8039655

85143_at

ADDON002560.hg

A_23_P354827

A_33_P3299386

GO:0000976

GO:0000977

GO:0000981

GO:0003677

GO:0005515

GO:0005634

GO:0006355

GO:0006357

GO:0008270

GO:0045892

GO:0045944

GO:0046872

HMNXSV003023688

Hs.180257.0.A1_3p_at

Hs.249219.0.S1_3p_at

ILMN_1760102

ILMN_2175727

PH_hs_0010669

TC19001898.hg

Participates

as a candidate of

KRAB-ZNF [nucleoplasm] (Homo sapiens)

Inferred To

ZNF550 [nucleoplasm] (Bos taurus)

ZNF550 [nucleoplasm] (Sus scrofa)

Cross References

RefSeq

XP_016881890.1, XP_011524869.1, XP_011524870.1, NP_001384301.1, NP_001264022.1, NP_001264021.1, NP_001264019.1, NP_001264020.1

OpenTargets

ENSG00000251369

ENSEMBL

ENSP00000514306, ENSP00000469537, ENST00000447310, ENSP00000469679, ENSP00000469580, ENST00000457177, ENSG00000251369, ENST00000699333, ENST00000376230

GeneCards

ZNF550

PRO

Q7Z398

Pharos - Targets

Q7Z398

Interactors (7)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q9H6S0 YTHDC2	1	YTHDC2 [nucleoplasm] (R-HSA-9935827)	0.643	4
UniProt:Q13263 TRIM28	3	TRIM28 [nucleoplasm] (R-HSA-974998) SUMO2-K554,K575,K676,K750,K779,K804-TRIM28 [nucleoplasm] (R-HSA-9842867) SUMO1-K554,575,676,750,779,804-TRIM28 [nucleoplasm] (R-HSA-3782600)	0.527	2
UniProt:Q96EB6 SIRT1	1	SIRT1 [nucleoplasm] (R-HSA-427531)	0.527	2
UniProt:Q00987 MDM2	11	p-S166,S188-MDM2 [nucleoplasm] (R-HSA-6793669) p-S166,S188-MDM2 [cytosol] (R-HSA-198638) MDM2 [cytosol] (R-HSA-198644) MDM2 [nucleoplasm] (R-HSA-69486) PolyUb,p-S166,S188-MDM2 [nucleoplasm] (R-HSA-6795669) p-5S,T-MDM2 [nucleoplasm] (R-HSA-6804954) MDM2 [endocytic vesicle membrane] (R-HSA-416849) MDM2 [plasma membrane] (R-HSA-416843) p-S166,S188,T218-MDM2 [nucleoplasm] (R-HSA-6792862) monoSUMO1-K182-MDM2 [nucleoplasm] (R-HSA-3000408) PolyUb-MDM2 [nucleoplasm] (R-HSA-6782472)	0.527	3
UniProt:P67775 PPP2CA	4	PPP2CA [cytosol] (R-HSA-165971) PPP2CA [nucleoplasm] (R-HSA-165978) p-Y307-PPP2CA [cytosol] (R-HSA-8857939) MeL-PPP2CA [nucleoplasm] (R-HSA-8857791)	0.527	2
UniProt:Q9UBX5 FBLN5	1	FBLN5 [extracellular region] (R-HSA-2161278)	0.527	2
UniProt:O43815 STRN	5	STRN [cytosol] (R-HSA-9037081) STRN(1-265)-PDGFRA(580-1089) fusion [cytosol] (R-HSA-9673902) p-11Y-STRN(1-265)-PDGFRA(580-1089) fusion [cytosol] (R-HSA-9673908) STRN(1-137)-ALK(1058-1620) fusion [cytosol] (R-HSA-9700485) STRN(1-137)-p-7Y-ALK(1058-1620) fusion [cytosol] (R-HSA-9700467)	0.527	2

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