Reactome | COL12A1 [extracellular region]

COL12A1 [extracellular region]

Stable Identifier

R-GGA-2192780

Type

Protein [EntityWithAccessionedSequence]

Species

Gallus gallus

Compartment

extracellular region

Synonyms

3x4Hyp-3Hyp-GalHyl-COL12A1, A0A1L1RPW4

Locations in the PathwayBrowser

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Extracellular matrix organization (Gallus gallus)

- Collagen formation (Gallus gallus)
  - Collagen biosynthesis and modifying enzymes (Gallus gallus)
    - Secretion of collagens (Gallus gallus)
      - Collagens and tropocollagens [extracellular region] (Gallus gallus)
        
        Non-fibrillar collagens [extracellular region] (Gallus gallus)
        
        Collagen type XII [extracellular region] (Gallus gallus)
        
        COL12A1 [extracellular region] (Gallus gallus)

External Reference Information

External Reference

UniProt:A0A1L1RPW4

Gene Names

COL12A1

Reference Genes

BioGPS Gene:395875 COL12A1

ENSEMBL:ENSGALG00000015908

KEGG Gene (Gallus gallus):395875 COL12A1

Monarch:395875 COL12A1

NCBI Gene:395875 COL12A1

Reference Transcript

Other Identifiers

395875

GO:0003674

GO:0005515

GO:0005575

GO:0005576

GO:0005581

GO:0005615

GO:0008150

GO:0009790

GO:0030154

GO:0031012

GO:0032991

GO:0035987

GO:0048646

GO:0048856

GO:0062023

GT_A_87_P008866

GT_A_87_P059421

Gga.4965.1.S1_a_at

Gga.4965.1.S1_at

Gga.4965.3.S1_a_at

Participant Of

hasComponent

Collagen type XII [extracellular region]

Other forms of this molecule

COL12A1 [endoplasmic reticulum lumen]

COL12A1 [extracellular region]

Inferred From

Collagen alpha-1(XII) chains [extracellular region] (Homo sapiens)

Collagen alpha-1(XXII) chains [extracellular region] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL12A1 [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

XP_015140225.1, NP_990352.2, XP_015140226.1

OpenTargets

ENSG00000111799

Ensembl

ENSGALP00000060841, ENSGALT00000083326, ENSGALG00000015908

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