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RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm]
Stable Identifier
R-GGA-109909
Type
Complex
Species
Gallus gallus
Compartment
nucleoplasm
Locations in the PathwayBrowser
Expand all
DNA Repair (Gallus gallus)
Nucleotide Excision Repair (Gallus gallus)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Gallus gallus)
Formation of TC-NER Pre-Incision Complex (Gallus gallus)
Active RNA Pol II complex transcribes lesion-containing DNA template (Gallus gallus)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
ERCC6 binds stalled RNA Pol II (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
ERCC8 (CSA) binds stalled RNA Pol II (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
RNA Pol II initiates transcription from damaged DNA template (Gallus gallus)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Gene expression (Transcription) (Gallus gallus)
RNA Polymerase II Transcription (Gallus gallus)
Generic Transcription Pathway (Gallus gallus)
Transcriptional Regulation by TP53 (Gallus gallus)
TP53 Regulates Transcription of DNA Repair Genes (Gallus gallus)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Gallus gallus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Gallus gallus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
RNA Polymerase II Pre-transcription Events (Gallus gallus)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Gallus gallus)
Paused processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Abortive termination of elongation after arrest (Gallus gallus)
Aborted elongation complex after arrest [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Resumption of elongation after recovery from pausing (Gallus gallus)
Paused processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
TFIIS-mediated recovery of elongation from arrest (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
RNA Polymerase II Transcription Elongation (Gallus gallus)
Addition of nucleotides leads to transcript elongation (Gallus gallus)
Elongation complex [nucleoplasm] (Gallus gallus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Formation of RNA Pol II elongation complex (Gallus gallus)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Gallus gallus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Pol II elongation complex moves on the template as transcript elongates (Gallus gallus)
Elongation complex prior to separation [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Processive elongation complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Separation of elongating transcript from template (Gallus gallus)
Elongation complex prior to separation [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Metabolism of RNA (Gallus gallus)
Processing of Capped Intron-Containing Pre-mRNA (Gallus gallus)
Formation of pre-mRNPs (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Internal Methylation of mRNA (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
mRNA Splicing (Gallus gallus)
mRNA Splicing - Minor Pathway (Gallus gallus)
ATAC spliceosome mediated 3' splice site cleavage, exon ligation (Gallus gallus)
ATAC C Complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
post exon ligation complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
ATAC spliceosome mediated Lariat formation,5' splice site cleavage (Gallus gallus)
ATAC C Complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Formation of AT-AC B Complex (Gallus gallus)
ATAC A Complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
ATAC B Complex [nucleoplasm] (Gallus gallus)
ATAC A Complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Formation of AT-AC C complex (Gallus gallus)
ATAC B Complex [nucleoplasm] (Gallus gallus)
ATAC A Complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
ATAC C Complex [nucleoplasm] (Gallus gallus)
capped, methylated pre-mRNA:CBC Complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
Signal Transduction (Gallus gallus)
Signaling by Nuclear Receptors (Gallus gallus)
ESR-mediated signaling (Gallus gallus)
Estrogen-dependent gene expression (Gallus gallus)
p-TEFb phosphorylates serine 2 in RNA polymerase II CTD (Gallus gallus)
MYB gene:hyperphosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Gallus gallus)
General
This complex/polymer has been computationally inferred (based on PANTHER) from a complex/polymer involved in an event that has been demonstrated in another species.
Participants
components
Ghost homologue of p-S2,S5(CTD)-POLR2A [nucleoplasm]
(Gallus gallus)
Ghost homologue of POLR2G [nucleoplasm]
(Gallus gallus)
POLR2B [nucleoplasm]
(Gallus gallus)
POLR2C [nucleoplasm]
(Gallus gallus)
POLR2D [nucleoplasm]
(Gallus gallus)
POLR2E [nucleoplasm]
(Gallus gallus)
POLR2H [nucleoplasm]
(Gallus gallus)
POLR2I [nucleoplasm]
(Gallus gallus)
POLR2J [nucleoplasm]
(Gallus gallus)
POLR2K [nucleoplasm]
(Gallus gallus)
POLR2L [nucleoplasm]
(Gallus gallus)
RPB6 [nucleoplasm]
(Gallus gallus)
Participates
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Gallus gallus)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Gallus gallus)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Gallus gallus)
RNA Polymerase II holoenzyme complex (hyperphosphorylated):TFIIF complex [nucleoplasm] (Gallus gallus)
Inferred From
RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm]
(Homo sapiens)
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