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phospho-p-4S-UPF1 [cytosol]
Stable Identifier
R-DRE-927856
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
F1RCY6
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
phospho-p-4S-UPF1 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
phospho-p-4S-UPF1 [cytosol] (Danio rerio)
mRNA Cleaved by SMG6 [cytosol] (Danio rerio)
phospho-p-4S-UPF1 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
phospho-p-4S-UPF1 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
phospho-p-4S-UPF1 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:F1RCY6
Reference Genes
BioGPS Gene:406783
ENSEMBL:ENSDARG00000016302
KEGG:dre:406783
Monarch:406783
NCBI Gene:406783
UCSC:F1RCY6
Reference Transcript
RefSeq:NM_213474.1
Other Identifiers
13085269
406783
A_15_P114866
A_15_P116572
A_15_P199676
A_15_P595287
A_15_P648226
A_15_P707881
CUST_27821_PI428451953
CUST_9776_PI428451958
DRER02669
Dr.13594.1.S1_at
Dr.7841.1.A1_at
ENSDART00000021011
ENSDART00000021011_2
ENSDART00000111013
GO:0000184
GO:0000932
GO:0000956
GO:0002376
GO:0003677
GO:0003723
GO:0003724
GO:0003824
GO:0004386
GO:0005524
GO:0005634
GO:0005737
GO:0008270
GO:0010468
GO:0016071
GO:0016787
GO:0030154
GO:0033077
GO:0043009
GO:0043226
GO:0046872
GO:0048471
GO:0048856
GO:0140098
GO:0140657
GO:2000624
GT_Spec_XM_005163640.1_202115
GT_Xhyb_NM_213474.1_237575
MADDr01008990
NM_213474
TC252057_R
ZV700S00001059
Participates
as a component of
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
mRNA Cleaved by SMG6 [cytosol] (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Other forms of this molecule
UPF1 [cytosol]
HELZ2 [nucleoplasm]
Inferred From
p-4S-UPF1 [cytosol]
(Homo sapiens)
Modified Residues
Name
O-phospho-L-serine at 1089 (in Homo sapiens)
Coordinate
1089
PsiMod Name
O-phospho-L-serine [MOD:00046]
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.
Name
O-phospho-L-serine at 1107 (in Homo sapiens)
Coordinate
1107
PsiMod Name
O-phospho-L-serine [MOD:00046]
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.
Name
O-phospho-L-serine at 1084 (in Homo sapiens)
Coordinate
1084
PsiMod Name
O-phospho-L-serine [MOD:00046]
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.
Name
O-phospho-L-serine at 1127 (in Homo sapiens)
Coordinate
1127
PsiMod Name
O-phospho-L-serine [MOD:00046]
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.
Cross References
RefSeq
NP_998639.1
ENSEMBL
ENSDARP00000153550
,
ENSDARP00000013006
,
ENSDART00000180271
,
ENSDART00000021011
ZFIN
ZDB-GENE-040426-2836
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