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wu:fa92b05 [cytosol]
Stable Identifier
R-DRE-72416
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
RPL15, Q6DHS3
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Danio rerio)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
Metabolism of proteins (Danio rerio)
Translation (Danio rerio)
Eukaryotic Translation Initiation (Danio rerio)
Cap-dependent Translation Initiation (Danio rerio)
Formation of a pool of free 40S subunits (Danio rerio)
Release of 40S and 60S subunits from the 80S ribosome (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
L13a-mediated translational silencing of Ceruloplasmin expression (Danio rerio)
Dissociation of L13a from the 60s ribosomal subunit (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
SRP-dependent cotranslational protein targeting to membrane (Danio rerio)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Danio rerio)
SRP:polypeptide+signal:ribosome [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
wu:fa92b05 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6DHS3
Gene Names
wu:fa92b05
Reference Genes
BioGPS Gene:445053 wu:fa92b05
ENSEMBL:ENSDARG00000009285
ENSEMBL:ENSDARG00000009285.9 wu:fa92b05
KEGG Gene (Danio rerio):445053 wu:fa92b05
Monarch:445053 wu:fa92b05
NCBI Gene:445053 wu:fa92b05
Reference Transcript
RefSeq:XM_021468049.1 wu:fa92b05
RefSeq:NM_001003447.1 wu:fa92b05
Other Identifiers
13068559
445053
A_15_P102712
A_15_P109165
A_15_P342020
A_15_P732836
A_15_P751181
CUST_17531_PI428451953
CUST_17532_PI428451953
CUST_17533_PI428451953
CUST_9975_PI428451958
DRER04276
DRER33149
DRER40158
DRER41681
DRER42459
Dr.2417.2.S1_at
ENSDART00000034837
ENSDART00000034837_1
ENSDART00000034837_2
GO:0002181
GO:0003723
GO:0003735
GO:0005198
GO:0005737
GO:0005829
GO:0005840
GO:0006412
GO:0022625
GO:0043226
GO:0044391
GO:1990904
GT_Spec_NM_001003447.1_192545
LOLS08876
MADDr01009669
NM_001003447
OTTDART00000030494
OTTDART00000030495
OTTDART00000030496
Participates
as a component of
60s ribosomal complex lacking L13a subunit [cytosol] (Danio rerio)
60S ribosomal complex [cytosol] (Danio rerio)
Inferred From
RPL15 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_021323724.1
,
NP_001003447.1
ZFIN
ZDB-GENE-040801-183
Ensembl
ENSDARP00000037569
,
ENSDART00000141397
,
ENSDARG00000009285
,
ENSDART00000133626
,
ENSDART00000143913
,
ENSDARP00000116196
,
ENSDARP00000122141
,
ENSDART00000034837
,
ENSDARP00000117485
PDB
7OYB
,
7OYA
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