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RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm]
Stable Identifier
R-DRE-71307
Type
Complex
Species
Danio rerio
Compartment
nucleoplasm
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
RNA Pol II CTD phosphorylation and interaction with CE (Danio rerio)
Extrusion of 5'-end of 30 nt long transcript through the pore in Pol II complex (Danio rerio)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Phosphorylation (Ser5) of RNA pol II CTD (Danio rerio)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
Abortive Initiation After Second Transition (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 4-9 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Abortive Initiation Before Second Transition (Danio rerio)
Pol II Promoter Escape Complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Abortive initiation after formation of the first phosphodiester bond (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Fall Back to Closed Pre-initiation Complex (Danio rerio)
pol II closed pre-initiation complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Initiation And Promoter Clearance (Danio rerio)
RNA Polymerase II Promoter Escape (Danio rerio)
Addition of Nucleotides 5 through 9 on the growing Transcript (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 9 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Addition of nucleotides 10 and 11 on the growing transcript: Third Transition (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 11 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 9 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Addition of nucleotides between position +11 and +30 (Danio rerio)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 11 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Addition of the third nucleotide on the nascent transcript (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Unwinding DNA for the nascent transcript (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Unwinding of DNA for the Nascent Transcript: Second Transition (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II Promoter Opening: First Transition (Danio rerio)
pol II closed pre-initiation complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Initiation (Danio rerio)
NTP Binds Active Site of RNA Polymerase II (Danio rerio)
Pol II initiation complex [nucleoplasm] (Danio rerio)
RNA Polymearse II:NTP:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Newly Formed Phosphodiester Bond Stabilized and PPi Released (Danio rerio)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP (Danio rerio)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Pol II initiation complex [nucleoplasm] (Danio rerio)
RNA Polymearse II:NTP:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening (Danio rerio)
Binding of TFIIE to the growing preinitiation complex (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Formation of the closed pre-initiation complex (Danio rerio)
pol II closed pre-initiation complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
Signal Transduction (Danio rerio)
Signaling by Receptor Tyrosine Kinases (Danio rerio)
Signaling by FGFR (Danio rerio)
Signaling by FGFR2 (Danio rerio)
FGFR2 alternative splicing (Danio rerio)
PTB and hnRNPA1 bind FGFR2 pre-mRNA to repress IIIb splicing and promote formation of FGFR2c mRNA (Danio rerio)
FGFR2 IIIc-specific splicing complex [nucleoplasm] (Danio rerio)
capped, methylated pre-FGFR2 mRNA:CBC complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
capped, methylated pre-FGFR2 mRNA:CBC complex [nucleoplasm] (Danio rerio)
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm] (Danio rerio)
General
This complex/polymer has been computationally inferred (based on PANTHER) from a complex/polymer involved in an event that has been demonstrated in another species.
Participants
components
RNA Polymerase II holoenzyme complex (unphosphorylated) [nucleoplasm]
(Danio rerio)
TFIIF [nucleoplasm]
(Danio rerio)
Participates
as an output of
Abortive initiation after formation of the first phosphodiester bond (Danio rerio)
Abortive Initiation After Second Transition (Danio rerio)
Abortive Initiation Before Second Transition (Danio rerio)
as a component of
pol II transcription complex containing 4-9 nucleotide long transcript [nucleoplasm] (Danio rerio)
Pol II Promoter Escape Complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
RNA Polymearse II:NTP:TFIIF complex [nucleoplasm] (Danio rerio)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Danio rerio)
pol II transcription complex containing 9 nucleotide long transcript [nucleoplasm] (Danio rerio)
pol II transcription complex containing 11 nucleotide long transcript [nucleoplasm] (Danio rerio)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Danio rerio)
capped, methylated pre-FGFR2 mRNA:CBC complex [nucleoplasm] (Danio rerio)
as an input of
Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex (Danio rerio)
Inferred From
RNA Polymerase II (unphosphorylated):TFIIF complex [nucleoplasm]
(Homo sapiens)
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