Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
zgc:91996 [nucleoplasm]
Stable Identifier
R-DRE-67455
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
XRCC1, F1QXI2
Locations in the PathwayBrowser
Expand all
DNA Repair (Danio rerio)
Base Excision Repair (Danio rerio)
Resolution of Abasic Sites (AP sites) (Danio rerio)
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway (Danio rerio)
LIG3 ligates NEIL1,NEIL2-generated single strand break (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
zgc:91996 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Danio rerio)
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
zgc:91996 [nucleoplasm] (Danio rerio)
PNKP hydrolyzes the terminal 3'Pi at the NEIL1,NEIL2-generated single strand break (SSB) (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
zgc:91996 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
zgc:91996 [nucleoplasm] (Danio rerio)
POLB incorporates a single nucleotide in place of excised AP residue in NEIL1,NEIL2-mediated AP site resolution (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
zgc:91996 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
zgc:91996 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:F1QXI2
Gene Names
zgc:91996
Reference Genes
BioGPS Gene:445480 zgc:91996
ENSEMBL:ENSDARG00000009494
ENSEMBL:ENSDARG00000009494.9 zgc:91996
KEGG Gene (Danio rerio):445480 zgc:91996
Monarch:445480 zgc:91996
NCBI Gene:445480 zgc:91996
Reference Transcript
RefSeq:NM_001003988.2 zgc:91996
Other Identifiers
13035367
445480
A_15_P155701
BC080268.1
CUST_25465_PI428451953
DRER02522
Dr.26014.1.A1_at
ENSDART00000020033
ENSDART00000020033_1
ENSDART00000020033_2
GO:0000012
GO:0003677
GO:0003684
GO:0005634
GO:0006281
GO:0006284
GO:0006303
GO:0043226
LOLS12554
XM_693592
Participates
as a component of
LIG3:XRCC1 [nucleoplasm] (Danio rerio)
Inferred From
XRCC1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001003988.2
ZFIN
ZDB-GENE-040822-30
Ensembl
ENSDART00000020033
,
ENSDARG00000009494
,
ENSDARP00000131012
,
ENSDARP00000023168
,
ENSDART00000172622
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text