Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
tcea1 [nucleoplasm]
Stable Identifier
R-DRE-65748
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
TCEA1, A0A2R8Q7Y8
Locations in the PathwayBrowser
Expand all
DNA Repair (Danio rerio)
Nucleotide Excision Repair (Danio rerio)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Danio rerio)
Dual incision in TC-NER (Danio rerio)
3' incision by ERCC5 (XPG) in TC-NER (Danio rerio)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Danio rerio)
TC-NER incision complex [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Danio rerio)
TC-NER incision complex [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Danio rerio)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Danio rerio)
TC-NER pre-incision complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
ERCC5 and RPA bind TC-NER site (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Formation of TC-NER Pre-Incision Complex (Danio rerio)
Assembly of the pre-incision complex in TC-NER (Danio rerio)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
UVSSA:USP7 deubiquitinates ERCC6 (Danio rerio)
TC-NER pre-incision complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Gap-filling DNA repair synthesis and ligation in TC-NER (Danio rerio)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Danio rerio)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Danio rerio)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
Generic Transcription Pathway (Danio rerio)
Transcriptional Regulation by TP53 (Danio rerio)
TP53 Regulates Transcription of DNA Repair Genes (Danio rerio)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Danio rerio)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Danio rerio)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Abortive termination of elongation after arrest (Danio rerio)
Aborted elongation complex after arrest [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Resumption of elongation after recovery from pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
TFIIS-mediated recovery of elongation from arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Elongation (Danio rerio)
Addition of nucleotides leads to transcript elongation (Danio rerio)
Elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Pol II elongation complex moves on the template as transcript elongates (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Separation of elongating transcript from template (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Danio rerio)
tcea1 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:A0A2R8Q7Y8
Gene Names
tcea1
Reference Genes
ENSEMBL:ENSDARG00000003531
Other Identifiers
13081969
336105
A_15_P101340
A_15_P570217
CJ005519
CJ005521
CUST_1017_PI423952288
CUST_1018_PI423952288
CUST_1019_PI423952288
CUST_1020_PI423952288
CUST_1021_PI423952288
CUST_1023_PI423952288
CUST_1024_PI423952288
CUST_20537_PI428451953
CUST_927_PI428451958
DRER15875
Dr.11529.1.S1_at
ENSDART00000009176
ENSDART00000009176_1
ENSDART00000009176_2
GO:0003674
GO:0003676
GO:0005575
GO:0005622
GO:0005634
GO:0006351
GO:0006355
GO:0008150
GO:0008270
GO:0009058
GO:0034641
GO:0043167
GO:0043226
GO:0045944
GO:0046872
GT_Spec_NM_199994.1_193265
JP005918
JP005920
LOLS02437
MADDr01007633
NM_199994
OTTDART00000024459
Participant Of
hasComponent
Aborted elongation complex after arrest [nucleoplasm]
CDK12-Phosphorylated Elongation Complex [nucleoplasm]
Elongation complex [nucleoplasm]
Elongation Complex at DNA Repair Genes [nucleoplasm]
Elongation complex prior to separation [nucleoplasm]
Elongation complex with separated and uncleaved transcript [nucleoplasm]
Paused processive elongation complex [nucleoplasm]
Processive elongation complex [nucleoplasm]
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm]
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm]
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
TC-NER pre-incision complex [nucleoplasm]
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm]
input
Assembly of the pre-incision complex in TC-NER
Inferred From
TCEA1 [nucleoplasm] (Homo sapiens)
Cross References
Ensembl
ENSDARG00000003531
,
ENSDART00000186387
,
ENSDARP00000147345
© 2021
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text