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neil1 [nucleoplasm]
Stable Identifier
R-DRE-5649648
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
NEIL1, Q6TGW9
Locations in the PathwayBrowser
Expand all
DNA Repair (Danio rerio)
Base Excision Repair (Danio rerio)
Base-Excision Repair, AP Site Formation (Danio rerio)
Depyrimidination (Danio rerio)
Cleavage of the damaged pyrimidine (Danio rerio)
NEIL1 cleaves DHU from damaged DNA (Danio rerio)
NEIL1:AP-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:DHU-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1 cleaves FapyA from damaged DNA (Danio rerio)
NEIL1:AP-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:FapyA-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1 cleaves FapyG from damaged DNA (Danio rerio)
NEIL1:AP-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:FapyG-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1 cleaves thymine glycol from damaged DNA (Danio rerio)
NEIL1:AP-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:Tg-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
Recognition and association of DNA glycosylase with site containing an affected pyrimidine (Danio rerio)
NEIL1 translocates to the nucleus (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
Resolution of Abasic Sites (AP sites) (Danio rerio)
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway (Danio rerio)
LIG3 ligates NEIL1,NEIL2-generated single strand break (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2 incises DNA strand 5' to the AP site (Danio rerio)
NEIL1,NEIL2:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:AP-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2 recruits POLB to incised AP site (Danio rerio)
NEIL1,NEIL2:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:NEIL2:POLB:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
PNKP hydrolyzes the terminal 3'Pi at the NEIL1,NEIL2-generated single strand break (SSB) (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
POLB excises the NEIL1,NEIL2-bound AP site (5'dRP) (Danio rerio)
NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1:NEIL2:POLB:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
POLB incorporates a single nucleotide in place of excised AP residue in NEIL1,NEIL2-mediated AP site resolution (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
neil1 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6TGW9
Gene Names
neil1
Reference Genes
BioGPS Gene:393253 neil1
ENSEMBL:ENSDARG00000018061
KEGG:dre:393253 neil1
Monarch:393253 neil1
NCBI Gene:393253 neil1
UCSC:Q6TGW9 neil1
Reference Transcript
RefSeq:NM_200283.2 neil1
Other Identifiers
13162236
393253
A_15_P105205
A_15_P366355
A_15_P720686
CUST_4625_PI428451958
DRER01707
DRER25674
Dr.20071.1.S1_at
ENSDART00000014052
ENSDART00000014052_1
ENSDART00000014052_2
GO:0003676
GO:0003824
GO:0003906
GO:0004519
GO:0005634
GO:0006281
GO:0006284
GO:0008270
GO:0016787
GO:0016798
GO:0019104
GO:0043226
GO:0140097
GT_Spec_NM_200283.1_6191
LOLS15065
MADDr01009172
OTTDART00000028894
Participates
as a component of
NEIL1,NEIL2:SSB(3'Pi-5'dRP)-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
NEIL1:FapyA-dsDNA [nucleoplasm] (Danio rerio)
NEIL1:FapyG-dsDNA [nucleoplasm] (Danio rerio)
NEIL1:Tg-dsDNA [nucleoplasm] (Danio rerio)
NEIL1:AP-dsDNA [nucleoplasm] (Danio rerio)
NEIL1:DHU-dsDNA [nucleoplasm] (Danio rerio)
as an output of
NEIL1 translocates to the nucleus (Danio rerio)
Other forms of this molecule
neil1 [cytosol]
Inferred From
NEIL1,NEIL2 [nucleoplasm]
(Homo sapiens)
NEIL1 [nucleoplasm]
(Homo sapiens)
Cross References
ENSEMBL
ENSDARG00000018061
,
ENSDARP00000017787
,
ENSDART00000014052
ZFIN
ZDB-GENE-040426-994
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