Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
Nucleosome with H3K9me3 [nucleoplasm]
Stable Identifier
R-DRE-5625748
Type
Complex
Species
Danio rerio
Compartment
nucleoplasm
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
Epigenetic regulation of gene expression (Danio rerio)
Regulation of endogenous retroelements (Danio rerio)
Regulation of endogenous retroelements by KRAB-ZFP proteins (Danio rerio)
SETDB1 in ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement trimethylates lysine-9 of histone H3 in nucleosomes (Danio rerio)
ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Danio rerio)
KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Danio rerio)
Retroelement chromatin with H3K9me3 [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
Regulation of endogenous retroelements by the Human Silencing Hub (HUSH) complex (Danio rerio)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1 RNA trimethylates lysine-9 of histone H3 (H3K9me3) (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3 heterochromatin trimethylates lysine-9 of histone H3 in adjacent nucleosome (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3:Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
HUSH complex:L1HS,L1PA2,3:Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
L1HS,L1PA2,3:Nucleosome with H2K9me3 [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
Signal Transduction (Danio rerio)
Signaling by Nuclear Receptors (Danio rerio)
ESR-mediated signaling (Danio rerio)
Estrogen-dependent gene expression (Danio rerio)
ESR1:ESTG and KDM4B bind H3K9me3 target gene enhancers (Danio rerio)
KDM4B-regulated genes:H3K9me3 nucleosome [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
KDM4B-regulated genes:H3K9me3 nucleosome:ESR1:ESTG:KDM4B [nucleoplasm] (Danio rerio)
KDM4B-regulated genes:H3K9me3 nucleosome [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
KDM4B demethylates H3K9me3 on estrogen-responsive target enhancers (Danio rerio)
KDM4B-regulated genes:H3K9me3 nucleosome:ESR1:ESTG:KDM4B [nucleoplasm] (Danio rerio)
KDM4B-regulated genes:H3K9me3 nucleosome [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
Signaling by Rho GTPases, Miro GTPases and RHOBTB3 (Danio rerio)
Signaling by Rho GTPases (Danio rerio)
RHO GTPase Effectors (Danio rerio)
RHO GTPases activate PKNs (Danio rerio)
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 (Danio rerio)
PKN1 phosphorylates histone 3 of nucleosomes associate with KLK2 and KLK3 promoters (Danio rerio)
p-T774-PKN1:AR:Androgen:KLK2,3 Gene:Nucleosome with Me3K-10-H3 [nucleoplasm] (Danio rerio)
KLK2,3 Gene:Nucleosome with Me3K-10-H3 [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
PKN1:AR complex binds promoters of KLK2 and KLK3 genes (Danio rerio)
KLK2,3 Gene:Nucleosome with Me3K-10-H3 [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
p-T774-PKN1:AR:Androgen:KLK2,3 Gene:Nucleosome with Me3K-10-H3 [nucleoplasm] (Danio rerio)
KLK2,3 Gene:Nucleosome with Me3K-10-H3 [nucleoplasm] (Danio rerio)
Nucleosome with H3K9me3 [nucleoplasm] (Danio rerio)
General
This complex/polymer has been computationally inferred (based on PANTHER) from a complex/polymer involved in an event that has been demonstrated in another species.
Participants
components
x 2
H3K9me3 [nucleoplasm]
(Danio rerio)
x 2
Histone H2A [nucleoplasm]
(Danio rerio)
x 2
Histone H2B [nucleoplasm]
(Danio rerio)
x 2
si:ch73-368j24.3 [nucleoplasm]
(Danio rerio)
Participates
as a component of
KDM4B-regulated genes:H3K9me3 nucleosome [nucleoplasm] (Danio rerio)
L1HS,L1PA2,3:Nucleosome with H2K9me3 [nucleoplasm] (Danio rerio)
Retroelement chromatin with H3K9me3 [nucleoplasm] (Danio rerio)
KLK2,3 Gene:Nucleosome with Me3K-10-H3 [nucleoplasm] (Danio rerio)
as an output of
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3 heterochromatin trimethylates lysine-9 of histone H3 in adjacent nucleosome (Danio rerio)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1 RNA trimethylates lysine-9 of histone H3 (H3K9me3) (Danio rerio)
Inferred From
Nucleosome with H3K9me3 [nucleoplasm]
(Homo sapiens)
© 2025
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text