Reactome | si:ch211-197n10.4 [extracellular region]

si:ch211-197n10.4 [extracellular region]

Stable Identifier

R-DRE-2470371

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

extracellular region

Synonyms

3x4Hyp-3Hyp-GalHyl-COL8A2(29-?), Q1LUA9

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q1LUA9

Gene Names

si:ch211-197n10.4

Reference Genes

BioGPS Gene:794479 si:ch211-197n10.4

ENSEMBL:ENSDARG00000060893

ENSEMBL:ENSDARG00000060893.7 si:ch211-197n10.4

KEGG Gene (Danio rerio):794479 si:ch211-197n10.4

Monarch:794479 si:ch211-197n10.4

NCBI Gene:794479 si:ch211-197n10.4

Reference Transcript

RefSeq:NM_001082901.1 si:ch211-197n10.4

Other Identifiers

13076523

794479

A_15_P140726

CUST_23551_PI428451953

CUST_5398_PI428451958

DRER36032

ENSDART00000086290

ENSDART00000086290_1

ENSDART00000086290_2

GO:0005515

GT_Spec_NM_001082901.1_236605

MADDr01006357

OTTDART00000018828

Participates

as a component of

Cleaved tropocollagen type VIII [extracellular region] (Danio rerio)

Other forms of this molecule

si:ch211-197n10.4 [endoplasmic reticulum lumen]

si:ch211-197n10.4 [extracellular region]

Inferred From

Cleaved collagen alpha-2(VIII) chains [extracellular region] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL8A2(29-?) [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_001076370.1

ZFIN

ZDB-GENE-060503-488

Ensembl

ENSDARG00000060893, ENSDARP00000114013, ENSDART00000136811

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