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si:ch211-197n10.4 [extracellular region]
Stable Identifier
R-DRE-2470371
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
extracellular region
Synonyms
3x4Hyp-3Hyp-GalHyl-COL8A2(29-?), Q1LUA9
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Degradation of the extracellular matrix (Danio rerio)
Collagen degradation (Danio rerio)
Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13 (Danio rerio)
Cleaved collagen fibrils [extracellular region] (Danio rerio)
Cleaved collagen type VIII fibril [extracellular region] (Danio rerio)
Cleaved tropocollagen type VIII [extracellular region] (Danio rerio)
si:ch211-197n10.4 [extracellular region] (Danio rerio)
External Reference Information
External Reference
UniProt:Q1LUA9
Gene Names
si:ch211-197n10.4
Reference Genes
BioGPS Gene:794479 si:ch211-197n10.4
ENSEMBL:ENSDARG00000060893
ENSEMBL:ENSDARG00000060893.7 si:ch211-197n10.4
KEGG Gene (Danio rerio):794479 si:ch211-197n10.4
Monarch:794479 si:ch211-197n10.4
NCBI Gene:794479 si:ch211-197n10.4
Reference Transcript
RefSeq:NM_001082901.1 si:ch211-197n10.4
Other Identifiers
13076523
794479
A_15_P140726
CUST_23551_PI428451953
CUST_5398_PI428451958
DRER36032
ENSDART00000086290
ENSDART00000086290_1
ENSDART00000086290_2
GO:0005515
GT_Spec_NM_001082901.1_236605
MADDr01006357
OTTDART00000018828
Participates
as a component of
Cleaved tropocollagen type VIII [extracellular region] (Danio rerio)
Other forms of this molecule
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [endoplasmic reticulum lumen]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
si:ch211-197n10.4 [extracellular region]
Inferred From
Cleaved collagen alpha-2(VIII) chains [extracellular region]
(Homo sapiens)
3x4Hyp-3Hyp-GalHyl-COL8A2(29-?) [extracellular region]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
O5-galactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-galactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.
Cross References
RefSeq
NP_001076370.1
ZFIN
ZDB-GENE-060503-488
Ensembl
ENSDARG00000060893
,
ENSDARP00000114013
,
ENSDART00000136811
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