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col1a1b [extracellular region]
Stable Identifier
R-DRE-2396440
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
extracellular region
Synonyms
Lysyl-pyrrolyl 3,4-Hyp 5-Hyl collagen alpha-1(I) chain, Q6PEI9
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Collagen formation (Danio rerio)
Assembly of collagen fibrils and other multimeric structures (Danio rerio)
Crosslinking of collagen fibrils (Danio rerio)
Formation of lysyl-pyrrole cross-links (Danio rerio)
Collagen type I fibrils with lysyl-pyrrole cross-links [extracellular region] (Danio rerio)
Collagen type I fibril with lysyl-pyrrole cross-links [extracellular region] (Danio rerio)
Tropocollagen type I with or without L-Pyrrole [extracellular region] (Danio rerio)
Tropocollagen type I with L-Pyrrole [extracellular region] (Danio rerio)
col1a1b [extracellular region] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6PEI9
Gene Names
col1a1b
Reference Genes
BioGPS Gene:325675 col1a1b
CTD Gene:325675 col1a1b
ENSEMBL:ENSDARG00000035809
KEGG:dre:325675 col1a1b
Monarch:325675 col1a1b
NCBI Gene:325675 col1a1b
UCSC:Q6PEI9 col1a1b
Reference Transcript
RefSeq:NM_201478.1 col1a1b
Participates
as a component of
Tropocollagen type I with L-Pyrrole [extracellular region] (Danio rerio)
Other forms of this molecule
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [endoplasmic reticulum lumen]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
col1a1b [extracellular region]
Inferred From
Lysyl-pyrrolyl collagen alpha-1(I) chains [extracellular region]
(Homo sapiens)
Lysyl-pyrrolyl 3,4-Hyp 5-Hyl collagen alpha-1(I) chain [extracellular region]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Name
(2S,5R)-5-hydroxylysine (lysyl-pyrrole cross-link) at unknown position
Modification
lysyl-pyrrole cross-link
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
NP_958886.1
ZFIN
ZDB-GENE-030131-4400
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