Reactome | COL5A3a [extracellular region]

COL5A3a [extracellular region]

Stable Identifier

R-DRE-2268819-2

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

extracellular region

Synonyms

3x4Hyp-GlcGalHyl-COL5A3(?-1745), D6MUD6

Locations in the PathwayBrowser

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Extracellular matrix organization (Danio rerio)

- Collagen formation (Danio rerio)
  - Collagen biosynthesis and modifying enzymes (Danio rerio)
    - Removal of fibrillar collagen C-propeptides (Danio rerio)
      - Fibrillar procollagens -N [extracellular region] (Danio rerio)
        
        Procollagen alpha-3(V) -N trimer [extracellular region] (Danio rerio)
        
        Alpha-3(V) -N propeptides [extracellular region] (Danio rerio)
        
        Homologues of 3x4Hyp-GlcGalHyl-COL5A3(?-1745) [extracellular region] (Danio rerio)
        
        COL5A3a [extracellular region] (Danio rerio)
    - Removal of fibrillar collagen N-propeptides (Danio rerio)
      - Fibrillar procollagens -N [extracellular region] (Danio rerio)
        
        Procollagen alpha-3(V) -N trimer [extracellular region] (Danio rerio)
        
        Alpha-3(V) -N propeptides [extracellular region] (Danio rerio)
        
        Homologues of 3x4Hyp-GlcGalHyl-COL5A3(?-1745) [extracellular region] (Danio rerio)
        
        COL5A3a [extracellular region] (Danio rerio)

External Reference Information

External Reference

UniProt:D6MUD6

Gene Names

COL5A3a

Reference Genes

BioGPS Gene:100330523 COL5A3a

CTD Gene:100330523 COL5A3a

ENSEMBL:ENSDARG00000098294

KEGG Gene (Danio rerio):100330523 COL5A3a

Monarch:100330523 COL5A3a

NCBI Gene:100330523 COL5A3a

Reference Transcript

RefSeq:NM_001190756.1 COL5A3a

Participates

as a member of

Homologues of 3x4Hyp-GlcGalHyl-COL5A3(?-1745) [extracellular region] (Danio rerio)

Other forms of this molecule

COL5A3a [endoplasmic reticulum lumen]

COL5A3a [extracellular region]

COL5A3a [endoplasmic reticulum lumen]

Inferred From

3x4Hyp-GlcGalHyl-COL5A3(?-1745) [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

O5-glucosylgalactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-glucosylgalactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-glucosylgalactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_001177685.1

ZFIN

ZDB-GENE-030131-968

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