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3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
Stable Identifier
R-DRE-2173274
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
endoplasmic reticulum lumen
Synonyms
A0MSJ1
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Collagen formation (Danio rerio)
Collagen biosynthesis and modifying enzymes (Danio rerio)
Collagen chain trimerization (Danio rerio)
Association of procollagen type XIII (Danio rerio)
Alpha-1(XIII) chains [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
C-linked procollagen type XIII trimer [endoplasmic reticulum lumen] (Danio rerio)
Alpha-1(XIII) chains [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
Glucosylation of collagen propeptide hydroxylysines (Danio rerio)
PLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Danio rerio)
Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3,4-Hyp Glu-Gal-Hyl-collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
PLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptides dissociates (Danio rerio)
Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3,4-Hyp Glu-Gal-Hyl-collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
PLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum membrane] (Danio rerio)
Glucosyl-galactosyl-hydroxylysyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3,4-Hyp Glu-Gal-Hyl-collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
Secretion of transmembrane collagens (Danio rerio)
C-linked procollagen type XIII trimer [endoplasmic reticulum lumen] (Danio rerio)
Alpha-1(XIII) chains [endoplasmic reticulum lumen] (Danio rerio)
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:A0MSJ1
Reference Genes
BioGPS Gene:560145
CTD Gene:560145
ENSEMBL:ENSDARG00000099930
KEGG Gene (Danio rerio):560145
Monarch:560145
NCBI Gene:560145
Reference Transcript
RefSeq:NM_001080575.1
Participates
as a candidate of
3,4-Hyp Glu-Gal-Hyl-collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
as a member of
Alpha-1(XIII) chains [endoplasmic reticulum lumen] (Danio rerio)
Other forms of this molecule
GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
GalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
GlcGalHyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
GalHyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
COL27A1(42-1860) [endoplasmic reticulum lumen]
COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL13A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL13A1 [endoplasmic reticulum lumen]
5Hyl-COL13A1 [endoplasmic reticulum lumen]
5Hyl-COL27A1(42-1860) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL27A1(42-1860) [extracellular region]
GalHyl-COL27A1(42-1860) [extracellular region]
3x4Hyp-COL27A1(42-1860) [extracellular region]
3x4Hyp-5Hyl-COL27A1(42-1860) [extracellular region]
3x4Hyp-GlcGalHyl-COL27A1(42-1860) [extracellular region]
3x4Hyp-GalHyl-COL27A1(42-1860) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL27A1(42-1860) [extracellular region]
GlcGalHyl-COL27A1(42-1860) [extracellular region]
3x4Hyp-3Hyp-COL27A1(42-1860) [extracellular region]
5Hyl-COL27A1(42-1860) [extracellular region]
COL27A1(42-1860) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL27A1(42-1860) [extracellular region]
3x4Hyp-GalHyl-COL27A1(625-1860) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL27A1(625-1860) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL27A1(625-1860) [extracellular region]
COL27A1(625-1860) [extracellular region]
GalHyl-COL27A1(625-1860) [extracellular region]
5Hyl-COL27A1(625-1860) [extracellular region]
3x4Hyp-3Hyp-COL27A1(625-1860) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL27A1(625-1860) [extracellular region]
3x4Hyp-5Hyl-COL27A1(625-1860) [extracellular region]
GlcGalHyl-COL27A1(625-1860) [extracellular region]
3x4Hyp-GlcGalHyl-COL27A1(625-1860) [extracellular region]
3x4Hyp-COL27A1(625-1860) [extracellular region]
3x4Hyp-5Hyl-COL13A1(?-717) [extracellular region]
3x4Hyp-GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1(?-717) [extracellular region]
GlcGalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-COL13A1(?-717) [extracellular region]
3x4Hyp-COL13A1(?-717) [extracellular region]
3x4Hyp-GalHyl-COL13A1(?-717) [extracellular region]
COL13A1(?-717) [extracellular region]
5Hyl-COL13A1(?-717) [extracellular region]
GalHyl-COL13A1(?-717) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL13A1(?-717) [extracellular region]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
3x4Hyp-3Hyp-GalHyl-COL13A1 [plasma membrane]
GlcGalHyl-COL13A1 [plasma membrane]
3x4Hyp-GalHyl-COL13A1 [plasma membrane]
3x4Hyp-GlcGalHyl-COL13A1 [plasma membrane]
5Hyl-COL13A1 [plasma membrane]
3x4Hyp-5Hyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-5Hyl-COL13A1 [plasma membrane]
COL13A1 [plasma membrane]
3x4Hyp-COL13A1 [plasma membrane]
GalHyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [plasma membrane]
3x4Hyp-3Hyp-GlcGalHyl-COL27A1 [extracellular region]
3x4Hyp-5Hyl-COL27A1 [extracellular region]
5Hyl-COL27A1 [extracellular region]
COL27A1 [extracellular region]
3x4Hyp-GalHyl-COL27A1 [extracellular region]
3x4Hyp-GlcGalHyl-COL27A1 [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL27A1 [extracellular region]
3x4Hyp-COL27A1 [extracellular region]
GlcGalHyl-COL27A1 [extracellular region]
3x4Hyp-3Hyp-COL27A1 [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL27A1 [extracellular region]
GalHyl-COL27A1 [extracellular region]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
A0MSJ1 [plasma membrane]
Inferred From
3x4Hyp-3Hyp-GlcGalHyl-COL13A1 [endoplasmic reticulum lumen]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
O5-glucosylgalactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-glucosylgalactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-glucosylgalactosyl-L-hydroxylysine.
Cross References
RefSeq
NP_001074044.1
ZFIN
ZDB-GENE-100119-2
PRO
A0MSJ1
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