Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
col27a1b [endoplasmic reticulum lumen]
Stable Identifier
R-DRE-2172975
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
endoplasmic reticulum lumen
Synonyms
3x4Hyp-3Hyp-COL19A1, A0MSJ1
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Collagen formation (Danio rerio)
Collagen biosynthesis and modifying enzymes (Danio rerio)
Collagen prolyl 3-hydroxylase converts 4-Hyp collagen to 3,4-Hyp collagen (Danio rerio)
Prolyl 3-hydroxylases:Fe2+:3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col27a1b [endoplasmic reticulum lumen] (Danio rerio)
Procollagen lysyl hydroxylases convert collagen lysines to 5-hydroxylysines (Danio rerio)
Lysyl hydroxylases:Lysyl hydroxylase procollagen substrates [endoplasmic reticulum membrane] (Danio rerio)
Lysyl hydroxylase procollagen substrates [endoplasmic reticulum lumen] (Danio rerio)
3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col27a1b [endoplasmic reticulum lumen] (Danio rerio)
Prolyl 3-hydroxylases:Fe2+:3,4-Hyp collagen propeptides dissociates (Danio rerio)
3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col27a1b [endoplasmic reticulum lumen] (Danio rerio)
Prolyl 3-hydroxylases:Fe2+:3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col27a1b [endoplasmic reticulum lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:A0MSJ1
Gene Names
col27a1b
Reference Genes
BioGPS Gene:560145 col27a1b
CTD Gene:560145 col27a1b
ENSEMBL:ENSDARG00000099930
KEGG Gene (Danio rerio):560145 col27a1b
Monarch:560145 col27a1b
NCBI Gene:560145 col27a1b
Reference Transcript
RefSeq:NM_001080575.1 col27a1b
Participant Of
hasCandidate
3,4-Hyp collagen propeptides [endoplasmic reticulum lumen]
Other forms of this molecule
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [endoplasmic reticulum lumen]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
col27a1b [extracellular region]
Inferred From
3x4Hyp-3Hyp-COL19A1 [endoplasmic reticulum lumen] (Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Cross References
RefSeq
NP_001074044.1
PRO
A0MSJ1
© 2021
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text