Reactome | cspg5a [extracellular region]

cspg5a [extracellular region]

Stable Identifier

R-DRE-2065230

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

extracellular region

Synonyms

D2,4(S)2-CSPG5, F8W3W2

Locations in the PathwayBrowser

Expand all

External Reference Information

External Reference

UniProt:F8W3W2

Gene Names

cspg5a

Reference Genes

BioGPS Gene:558206 cspg5a

CTD Gene:558206 cspg5a

ENSEMBL:ENSDARG00000069981

Monarch:558206 cspg5a

NCBI Gene:558206 cspg5a

Reference Transcript

RefSeq:XM_699688.7 cspg5a

Other Identifiers

13041382

558206

A_15_P134166

A_15_P178686

A_15_P272886

A_15_P284656

CUST_2904_PI428451958

CUST_30_PI399344711

DRER16011

DRER46596

DRER46750

ENSDART00000102305

ENSDART00000102305_1

ENSDART00000102305_2

GO:0005575

GO:0007399

GO:0008150

GO:0016020

GO:0016021

GO:0048856

GT_Xhyb_XM_005158277.1_324605

GT_Xhyb_XM_005158278.1_80641

GT_Xhyb_XM_005158279.1_391985

GT_Xhyb_XM_005158280.1_324615

GT_Xhyb_XM_699688.5_80631

LOLS05935

XM_699688

Participant Of

hasMember

D2,4(S)2-PGs [extracellular region]

Other forms of this molecule

cspg5a [lysosomal lumen]

cspg5a [Golgi lumen]

cspg5a [extracellular region]

cspg5a [Golgi lumen]

cspg5a [extracellular region]

Inferred From

D2,4(S)2-CSPG5 [extracellular region] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63517) at unknown position

Modification

beta-D-GalNAc-(1->4)-beta-D-IdoA2S-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

XP_704780.3

ZFIN

ZDB-GENE-080425-4

Ensembl

ENSDART00000148475, ENSDARG00000069981, ENSDARP00000124012