Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
bgna [Golgi lumen]
Stable Identifier
R-DRE-2065139
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
D2,4(S)2-BGN, Q6GMI5
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Chondroitin sulfate/dermatan sulfate metabolism (Danio rerio)
Dermatan sulfate biosynthesis (Danio rerio)
CHST14 transfers SO4(2-) to GalNAc in dermatan or DS (Danio rerio)
CHST14 substrates [Golgi lumen] (Danio rerio)
D2,4(S)2-PG [Golgi lumen] (Danio rerio)
bgna [Golgi lumen] (Danio rerio)
DSPGs are secreted (Danio rerio)
DSPGs [Golgi lumen] (Danio rerio)
D2,4(S)2-PG [Golgi lumen] (Danio rerio)
bgna [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6GMI5
Gene Names
bgna
Reference Genes
BioGPS Gene:431774 bgna
CTD Gene:431774 bgna
ENSEMBL:ENSDARG00000017884
KEGG:dre:431774 bgna
Monarch:431774 bgna
NCBI Gene:431774 bgna
UCSC:Q6GMI5 bgna
Reference Transcript
RefSeq:NM_001002227.1 bgna
Other Identifiers
13251322
431774
A_15_P120412
A_15_P621146
CUST_1931_PI428451958
CUST_19_PI399344711
DRER03501
ENSDART00000027225
ENSDART00000027225_1
ENSDART00000027225_2
GO:0005515
GO:0005576
GO:0005615
GT_Spec_NM_001002227.1_268535
MADDr01009348
NM_001002227
OTTDART00000028391
Participates
as a member of
D2,4(S)2-PG [Golgi lumen] (Danio rerio)
Other forms of this molecule
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [extracellular region]
bgna [extracellular region]
bgna [extracellular region]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [extracellular region]
bgna [extracellular region]
bgna [extracellular region]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
Inferred From
D2,4(S)2-BGN [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63517) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-IdoA2S-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
ENSEMBL
ENSDART00000184946
,
ENSDARP00000017536
,
ENSDARP00000156458
,
ENSDART00000027225
ZFIN
ZDB-GENE-040704-74
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text