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rig-5 [Golgi lumen]
Stable Identifier
R-CEL-2076495
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
Golgi lumen
Synonyms
HS(4)-HSPG2, C6KRM7
Locations in the PathwayBrowser
Expand all
Metabolism (Caenorhabditis elegans)
Metabolism of carbohydrates (Caenorhabditis elegans)
Glycosaminoglycan metabolism (Caenorhabditis elegans)
Heparan sulfate/heparin (HS-GAG) metabolism (Caenorhabditis elegans)
HS-GAG biosynthesis (Caenorhabditis elegans)
HS3ST1 sulfates GlcN at C3 in heparan sulfate (Caenorhabditis elegans)
HS(4)-PGs [Golgi lumen] (Caenorhabditis elegans)
Homologues of HS(4)-HSPG2 [Golgi lumen] (Caenorhabditis elegans)
rig-5 [Golgi lumen] (Caenorhabditis elegans)
HS3STs sulfate GlcN at C3 in heparan sulfate (Caenorhabditis elegans)
HS(4)-PGs [Golgi lumen] (Caenorhabditis elegans)
Homologues of HS(4)-HSPG2 [Golgi lumen] (Caenorhabditis elegans)
rig-5 [Golgi lumen] (Caenorhabditis elegans)
Some HSPGs are secreted to the plasma membrane (Caenorhabditis elegans)
HSPGs [Golgi lumen] (Caenorhabditis elegans)
HS(4)-PGs [Golgi lumen] (Caenorhabditis elegans)
Homologues of HS(4)-HSPG2 [Golgi lumen] (Caenorhabditis elegans)
rig-5 [Golgi lumen] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:C6KRM7
Gene Names
rig-5
Reference Genes
BioGPS Gene:172791 rig-5
CTD Gene:172791 rig-5
ENSEMBL:WBGene00004372
Monarch:172791 rig-5
NCBI Gene:172791 rig-5
Wormbase:WBGene00004372
Reference Transcript
RefSeq:NM_001264202.1 rig-5
Other Identifiers
172392_x_at
172791
18466193
192133_s_at
A_12_P105960
C36F7.4
C36F7.4b
C36F7.4c_512-571_0.776_100_B
C36F7.4c_610-669_0.920_7_A
C36F7.4c_790-849_0.901_9_C
CE24830
CE_WBGene00004372_A
CGZ0007986
WBGene00004372
cea2.d.01254
Participates
as a member of
Homologues of HS(4)-HSPG2 [Golgi lumen] (Caenorhabditis elegans)
Other forms of this molecule
rig-5 [extracellular region]
rig-5 [extracellular region]
rig-5 [extracellular region]
rig-5 [extracellular region]
rig-5 [extracellular region]
rig-5 [lysosomal lumen]
rig-5 [lysosomal lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [plasma membrane]
rig-5 [plasma membrane]
rig-5 [plasma membrane]
rig-5 [plasma membrane]
rig-5 [plasma membrane]
rig-5 [plasma membrane]
rig-5 [extracellular region]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
rig-5 [Golgi lumen]
Inferred From
HS(4)-HSPG2 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63657) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001251131.1
PDB
6ON6
,
6ONB
,
6ON9
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