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KDM4B [nucleoplasm]
Stable Identifier
R-BTA-3214396
Type
Protein [EntityWithAccessionedSequence]
Species
Bos taurus
Compartment
nucleoplasm
Synonyms
KDM4B, E1BA41
Locations in the PathwayBrowser
Expand all
Chromatin organization (Bos taurus)
Chromatin modifying enzymes (Bos taurus)
HDMs demethylate histones (Bos taurus)
KDM4A, KDM4B, KDM4C, KDM4D demethylate Me2K10-histone H3 (Bos taurus)
KDM4A, KDM4B, KDM4C, KDM4D, MINA [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
KDM4A, KDM4B, KDM4C, KDM4D, MINA demethylate Me3K10-histone H3 (Bos taurus)
KDM4A, KDM4B, KDM4C, KDM4D, MINA [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA Repair (Bos taurus)
DNA Double-Strand Break Repair (Bos taurus)
DNA Double Strand Break Response (Bos taurus)
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks (Bos taurus)
ATM phosphorylates HERC2 (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:HERC2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+ [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:p-T4827-HERC2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+ [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
HERC2 and PIAS4 are recruited to DNA DSBs (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+ [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:HERC2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+ [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
HERC2 facilitates UBE2N:UBE2V2 binding to RNF8 (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
KDM4A,B bind H4K20Me2 (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
PIAS4 SUMOylates HERC2 with SUMO1 at DNA DSBs (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:p-T4827-HERC2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+ [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
RNF168 binds DNA DSBs (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:RNF168:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
RNF8 and RNF168 ubiquitinate H2AFX (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:K63PolyUb-K14,K16,p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:RNF168:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:K63PolyUb-K14,K16,p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:RNF168:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
RNF8 and RNF168 ubiquitinate KDM4A,B (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:K63PolyUb-K14,K16,p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+:SUMO1:p-T4827-HERC2:UBE2N:UBE2V2:RNF168:PIAS4 [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:K63PolyUb-K14,K16,p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
RNF8 binds phosphorylated MDC1 at DNA DSBs (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1:RNF8:Zn2+ [nucleoplasm] (Bos taurus)
DNA DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:p-S139-H2AFX,Me2K21-HIST1H4A-Nucleosome:p-5T-MDC1:KDM4A,B:p-S102-WHSC1 [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
Signal Transduction (Bos taurus)
Signaling by Nuclear Receptors (Bos taurus)
ESR-mediated signaling (Bos taurus)
Estrogen-dependent gene expression (Bos taurus)
ESR1:ESTG and KDM4B bind H3K9me3 target gene enhancers (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
KDM4B-regulated genes:H3K9me3 nucleosome:ESR1:ESTG:KDM4B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
KDM4B demethylates H3K9me3 on estrogen-responsive target enhancers (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
KDM4B-regulated genes:H3K9me3 nucleosome:ESR1:ESTG:KDM4B [nucleoplasm] (Bos taurus)
KDM4B [nucleoplasm] (Bos taurus)
External Reference Information
External Reference
UniProt:E1BA41
Gene Names
KDM4B
Reference Genes
ENSEMBL:ENSBTAG00000015487.5
Reference Transcript
RefSeq:XM_010798306.2 KDM4B
RefSeq:XM_002688920.5 KDM4B
RefSeq:XM_010806995.2 KDM4B
RefSeq:XM_015464137.1 KDM4B
RefSeq:XM_015464138.1 KDM4B
RefSeq:XM_584880.9 KDM4B
Other Identifiers
508141
GO:0000785
GO:0003824
GO:0005634
GO:0005654
GO:0005694
GO:0005721
GO:0005829
GO:0006325
GO:0006338
GO:0007420
GO:0008270
GO:0010468
GO:0016491
GO:0032452
GO:0032454
GO:0036211
GO:0043226
GO:0046872
GO:0048856
GO:0051213
GO:0051864
GO:0140096
GO:0140684
Participates
as an output of
KDM4B demethylates H3K9me3 on estrogen-responsive target enhancers (Bos taurus)
as an input of
ESR1:ESTG and KDM4B bind H3K9me3 target gene enhancers (Bos taurus)
as a component of
KDM4B-regulated genes:H3K9me3 nucleosome:ESR1:ESTG:KDM4B [nucleoplasm] (Bos taurus)
as a member of
KDM4A, KDM4B, KDM4C, KDM4D, MINA [nucleoplasm] (Bos taurus)
KDM4A,B [nucleoplasm] (Bos taurus)
Other forms of this molecule
KDM4B [nucleoplasm]
Inferred From
KDM4B [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_010805297.1
,
XP_015319623.1
,
XP_010796608.1
,
XP_015319624.1
,
XP_002688966.2
,
XP_584880.4
OpenTargets
ENSG00000127663
Ensembl
ENSBTAP00000020586
,
ENSBTAT00000020586
,
ENSBTAG00000015487
VGNC
30528
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